Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 INTS4P1-201ENST00000438455 1935 ntBASIC18.84■□□□□ 0.61
CACNA2D1P54289 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 AC007967.3-201ENST00000434308 558 ntBASIC18.84■□□□□ 0.61
CACNA2D1P54289 TPM4P1-201ENST00000436100 807 ntBASIC18.84■□□□□ 0.61
CACNA2D1P54289 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 AL031008.1-201ENST00000619963 541 ntBASIC18.84■□□□□ 0.61
CACNA2D1P54289 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 AL354751.1-201ENST00000412768 1863 ntBASIC18.84■□□□□ 0.61
CACNA2D1P54289 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CACNA2D1P54289 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA2D1P54289 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CACNA2D1P54289 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA2D1P54289 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA2D1P54289 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA2D1P54289 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CACNA2D1P54289 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CACNA2D1P54289 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA2D1P54289 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA2D1P54289 ABALON-201ENST00000629058 1903 ntBASIC18.83■□□□□ 0.6
CACNA2D1P54289 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNA2D1P54289 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
CACNA2D1P54289 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNA2D1P54289 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.83■□□□□ 0.6
CACNA2D1P54289 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNA2D1P54289 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNA2D1P54289 AC009533.2-201ENST00000543664 586 ntBASIC18.83■□□□□ 0.6
CACNA2D1P54289 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.83■□□□□ 0.6
CACNA2D1P54289 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNA2D1P54289 AL591684.3-201ENST00000605187 298 ntBASIC18.83■□□□□ 0.6
CACNA2D1P54289 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.83■□□□□ 0.6
CACNA2D1P54289 REXO1L6P-202ENST00000619970 1078 ntBASIC18.83■□□□□ 0.6
CACNA2D1P54289 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.83■□□□□ 0.6
CACNA2D1P54289 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNA2D1P54289 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNA2D1P54289 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNA2D1P54289 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CACNA2D1P54289 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNA2D1P54289 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNA2D1P54289 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA2D1P54289 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA2D1P54289 AC090340.1-201ENST00000620778 4980 ntBASIC18.82■□□□□ 0.6
CACNA2D1P54289 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA2D1P54289 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNA2D1P54289 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 AC132008.2-207ENST00000454517 770 ntBASIC18.82■□□□□ 0.6
CACNA2D1P54289 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNA2D1P54289 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms