Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.69■□□□□ 0.26
SMSP52788 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.69■□□□□ 0.26
SMSP52788 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.69■□□□□ 0.26
SMSP52788 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.69■□□□□ 0.26
SMSP52788 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.69■□□□□ 0.26
SMSP52788 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.69■□□□□ 0.26
SMSP52788 KRT17P6-201ENST00000453795 1220 ntBASIC16.69■□□□□ 0.26
SMSP52788 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.69■□□□□ 0.26
SMSP52788 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.69■□□□□ 0.26
SMSP52788 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.69■□□□□ 0.26
SMSP52788 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.69■□□□□ 0.26
SMSP52788 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.69■□□□□ 0.26
SMSP52788 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.69■□□□□ 0.26
SMSP52788 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SMSP52788 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.69■□□□□ 0.26
SMSP52788 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SMSP52788 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMSP52788 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.69■□□□□ 0.26
SMSP52788 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.69■□□□□ 0.26
SMSP52788 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SMSP52788 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.69■□□□□ 0.26
SMSP52788 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 CHCHD2P8-201ENST00000429873 447 ntBASIC16.68■□□□□ 0.26
SMSP52788 MCCD1P1-208ENST00000445732 328 ntBASIC16.68■□□□□ 0.26
SMSP52788 FDX1P1-201ENST00000449115 551 ntBASIC16.68■□□□□ 0.26
SMSP52788 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.68■□□□□ 0.26
SMSP52788 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.68■□□□□ 0.26
SMSP52788 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
SMSP52788 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.68■□□□□ 0.26
SMSP52788 MIR3180-5-201ENST00000583743 153 ntBASIC16.68■□□□□ 0.26
SMSP52788 AP002414.4-201ENST00000589764 1148 ntBASIC16.68■□□□□ 0.26
SMSP52788 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SMSP52788 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.68■□□□□ 0.26
SMSP52788 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.68■□□□□ 0.26
SMSP52788 KRT8P10-201ENST00000450021 1447 ntBASIC16.68■□□□□ 0.26
SMSP52788 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SMSP52788 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMSP52788 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.68■□□□□ 0.26
SMSP52788 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SMSP52788 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SMSP52788 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.67■□□□□ 0.26
SMSP52788 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.67■□□□□ 0.26
SMSP52788 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
SMSP52788 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.67■□□□□ 0.26
SMSP52788 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.67■□□□□ 0.26
SMSP52788 GPAT2P1-201ENST00000444924 1672 ntBASIC16.67■□□□□ 0.26
SMSP52788 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SMSP52788 MIR564-202ENST00000385049 94 ntBASIC16.67■□□□□ 0.26
SMSP52788 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.67■□□□□ 0.26
SMSP52788 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SMSP52788 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.67■□□□□ 0.26
SMSP52788 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms