Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR1P51861 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDR1P51861 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR1P51861 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDR1P51861 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.48■□□□□ 0.71
CDR1P51861 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.48■□□□□ 0.71
CDR1P51861 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.48■□□□□ 0.71
CDR1P51861 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.48■□□□□ 0.71
CDR1P51861 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDR1P51861 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.48■□□□□ 0.71
CDR1P51861 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDR1P51861 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.48■□□□□ 0.71
CDR1P51861 AL121672.3-201ENST00000608644 468 ntBASIC19.48■□□□□ 0.71
CDR1P51861 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDR1P51861 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR1P51861 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.48■□□□□ 0.71
CDR1P51861 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR1P51861 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR1P51861 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR1P51861 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDR1P51861 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR1P51861 MYLKP1-201ENST00000509077 1580 ntBASIC19.48■□□□□ 0.71
CDR1P51861 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.48■□□□□ 0.71
CDR1P51861 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDR1P51861 KRT18P1-202ENST00000452408 1331 ntBASIC19.48■□□□□ 0.71
CDR1P51861 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDR1P51861 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDR1P51861 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDR1P51861 SDHAP2-201ENST00000455183 2001 ntBASIC19.47■□□□□ 0.71
CDR1P51861 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.47■□□□□ 0.71
CDR1P51861 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CDR1P51861 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.47■□□□□ 0.71
CDR1P51861 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.47■□□□□ 0.71
CDR1P51861 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.47■□□□□ 0.71
CDR1P51861 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.47■□□□□ 0.71
CDR1P51861 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.47■□□□□ 0.71
CDR1P51861 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.47■□□□□ 0.71
CDR1P51861 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CDR1P51861 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.47■□□□□ 0.71
CDR1P51861 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDR1P51861 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDR1P51861 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDR1P51861 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDR1P51861 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.46■□□□□ 0.71
CDR1P51861 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.46■□□□□ 0.71
CDR1P51861 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.46■□□□□ 0.71
CDR1P51861 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.46■□□□□ 0.71
CDR1P51861 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CDR1P51861 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
CDR1P51861 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 ATP5G2P1-201ENST00000433580 426 ntBASIC19.46■□□□□ 0.71
CDR1P51861 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.46■□□□□ 0.71
CDR1P51861 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.46■□□□□ 0.71
CDR1P51861 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.46■□□□□ 0.71
CDR1P51861 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDR1P51861 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.46■□□□□ 0.71
CDR1P51861 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDR1P51861 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.46■□□□□ 0.71
CDR1P51861 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.46■□□□□ 0.71
CDR1P51861 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.46■□□□□ 0.71
CDR1P51861 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDR1P51861 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.46■□□□□ 0.71
CDR1P51861 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms