Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCA2P51587 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRCA2P51587 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
BRCA2P51587 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
BRCA2P51587 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.74■□□□□ 0.75
BRCA2P51587 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
BRCA2P51587 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCA2P51587 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCA2P51587 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.74■□□□□ 0.75
BRCA2P51587 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
BRCA2P51587 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.74■□□□□ 0.75
BRCA2P51587 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
BRCA2P51587 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.73■□□□□ 0.75
BRCA2P51587 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.73■□□□□ 0.75
BRCA2P51587 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.73■□□□□ 0.75
BRCA2P51587 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.73■□□□□ 0.75
BRCA2P51587 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRCA2P51587 AC018445.3-201ENST00000624177 1945 ntBASIC19.73■□□□□ 0.75
BRCA2P51587 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCA2P51587 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCA2P51587 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.73■□□□□ 0.75
BRCA2P51587 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRCA2P51587 MIR943-201ENST00000401286 94 ntBASIC19.73■□□□□ 0.75
BRCA2P51587 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.73■□□□□ 0.75
BRCA2P51587 AL805961.1-202ENST00000641562 540 ntBASIC19.73■□□□□ 0.75
BRCA2P51587 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.73■□□□□ 0.75
BRCA2P51587 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.73■□□□□ 0.75
BRCA2P51587 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCA2P51587 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCA2P51587 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
BRCA2P51587 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.73■□□□□ 0.75
BRCA2P51587 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCA2P51587 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCA2P51587 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCA2P51587 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.73■□□□□ 0.75
BRCA2P51587 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCA2P51587 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.73■□□□□ 0.75
BRCA2P51587 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 AC003669.1-201ENST00000334569 611 ntBASIC19.72■□□□□ 0.75
BRCA2P51587 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 GPS2P2-201ENST00000430745 888 ntBASIC19.72■□□□□ 0.75
BRCA2P51587 AC074386.1-202ENST00000463561 864 ntBASIC19.72■□□□□ 0.75
BRCA2P51587 AC068137.2-201ENST00000605408 478 ntBASIC19.72■□□□□ 0.75
BRCA2P51587 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
BRCA2P51587 KLF2P3-201ENST00000451977 1087 ntBASIC19.72■□□□□ 0.75
BRCA2P51587 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
BRCA2P51587 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.72■□□□□ 0.75
BRCA2P51587 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.72■□□□□ 0.75
BRCA2P51587 LINC02560-201ENST00000596379 459 ntBASIC19.72■□□□□ 0.75
BRCA2P51587 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
BRCA2P51587 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
BRCA2P51587 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.72■□□□□ 0.75
BRCA2P51587 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.72■□□□□ 0.75
BRCA2P51587 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
BRCA2P51587 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCA2P51587 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCA2P51587 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
BRCA2P51587 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRCA2P51587 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRCA2P51587 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.71■□□□□ 0.75
BRCA2P51587 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCA2P51587 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.71■□□□□ 0.75
BRCA2P51587 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.71■□□□□ 0.75
BRCA2P51587 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCA2P51587 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCA2P51587 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCA2P51587 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
BRCA2P51587 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCA2P51587 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.71■□□□□ 0.75
BRCA2P51587 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
BRCA2P51587 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCA2P51587 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.71■□□□□ 0.75
BRCA2P51587 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
BRCA2P51587 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
BRCA2P51587 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.71■□□□□ 0.75
BRCA2P51587 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.7■□□□□ 0.74
BRCA2P51587 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRCA2P51587 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRCA2P51587 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
BRCA2P51587 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.7■□□□□ 0.74
BRCA2P51587 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRCA2P51587 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRCA2P51587 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
BRCA2P51587 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRCA2P51587 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms