Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCA4P51532 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCA4P51532 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC31.53■■■□□ 2.64
SMARCA4P51532 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
SMARCA4P51532 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCA4P51532 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCA4P51532 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
SMARCA4P51532 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCA4P51532 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCA4P51532 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCA4P51532 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC31.53■■■□□ 2.64
SMARCA4P51532 TIMM8BP1-201ENST00000452384 211 ntBASIC31.53■■■□□ 2.64
SMARCA4P51532 SLC25A6P2-201ENST00000497974 877 ntBASIC31.53■■■□□ 2.64
SMARCA4P51532 NMU-203ENST00000507338 658 ntTSL 3 BASIC31.53■■■□□ 2.64
SMARCA4P51532 AL035252.4-201ENST00000624174 288 ntBASIC31.53■■■□□ 2.64
SMARCA4P51532 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC31.52■■■□□ 2.64
SMARCA4P51532 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SMARCA4P51532 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SMARCA4P51532 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC31.52■■■□□ 2.64
SMARCA4P51532 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
SMARCA4P51532 HLA-DRB6-201ENST00000411500 1235 ntBASIC31.52■■■□□ 2.64
SMARCA4P51532 AF228730.6-201ENST00000641497 218 ntBASIC31.52■■■□□ 2.64
SMARCA4P51532 AC084121.3-201ENST00000641716 218 ntBASIC31.52■■■□□ 2.64
SMARCA4P51532 AC105233.6-201ENST00000642093 218 ntBASIC31.52■■■□□ 2.64
SMARCA4P51532 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC31.52■■■□□ 2.64
SMARCA4P51532 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC31.52■■■□□ 2.64
SMARCA4P51532 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SMARCA4P51532 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
SMARCA4P51532 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SMARCA4P51532 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SMARCA4P51532 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SMARCA4P51532 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SMARCA4P51532 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
SMARCA4P51532 BAD-202ENST00000394531 631 ntTSL 3 BASIC31.51■■■□□ 2.63
SMARCA4P51532 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC31.51■■■□□ 2.63
SMARCA4P51532 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC31.51■■■□□ 2.63
SMARCA4P51532 TAF8-206ENST00000472818 719 ntTSL 2 BASIC31.51■■■□□ 2.63
SMARCA4P51532 NAA60-208ENST00000570819 833 ntTSL 2 BASIC31.51■■■□□ 2.63
SMARCA4P51532 AC012645.4-201ENST00000610691 1061 ntBASIC31.51■■■□□ 2.63
SMARCA4P51532 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SMARCA4P51532 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SMARCA4P51532 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC31.51■■■□□ 2.63
SMARCA4P51532 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SMARCA4P51532 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC31.51■■■□□ 2.63
SMARCA4P51532 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SMARCA4P51532 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCA4P51532 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCA4P51532 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCA4P51532 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCA4P51532 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC31.5■■■□□ 2.63
SMARCA4P51532 AC244107.1-201ENST00000442033 332 ntBASIC31.5■■■□□ 2.63
SMARCA4P51532 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC31.5■■■□□ 2.63
SMARCA4P51532 VPS29-207ENST00000549970 818 ntTSL 3 BASIC31.5■■■□□ 2.63
SMARCA4P51532 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC31.5■■■□□ 2.63
SMARCA4P51532 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCA4P51532 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCA4P51532 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC31.5■■■□□ 2.63
SMARCA4P51532 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC31.5■■■□□ 2.63
SMARCA4P51532 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCA4P51532 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCA4P51532 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC31.5■■■□□ 2.63
SMARCA4P51532 AL096828.2-201ENST00000567259 1965 ntBASIC31.5■■■□□ 2.63
SMARCA4P51532 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCA4P51532 AC140658.5-201ENST00000438532 169 ntBASIC31.49■■■□□ 2.63
SMARCA4P51532 AL513480.1-201ENST00000451731 511 ntBASIC31.49■■■□□ 2.63
SMARCA4P51532 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA4P51532 AC107918.2-201ENST00000530817 355 ntBASIC31.49■■■□□ 2.63
SMARCA4P51532 PUDP-206ENST00000540122 825 ntTSL 2 BASIC31.49■■■□□ 2.63
SMARCA4P51532 DUX4L27-201ENST00000554796 1261 ntBASIC31.49■■■□□ 2.63
SMARCA4P51532 DUT-210ENST00000559935 569 ntTSL 3 BASIC31.49■■■□□ 2.63
SMARCA4P51532 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC31.49■■■□□ 2.63
SMARCA4P51532 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA4P51532 HFE2-206ENST00000634927 506 ntTSL 4 BASIC31.49■■■□□ 2.63
SMARCA4P51532 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA4P51532 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA4P51532 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA4P51532 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA4P51532 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA4P51532 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA4P51532 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA4P51532 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA4P51532 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA4P51532 KRT18P32-201ENST00000424695 1287 ntBASIC31.49■■■□□ 2.63
SMARCA4P51532 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC31.49■■■□□ 2.63
SMARCA4P51532 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
SMARCA4P51532 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC31.48■■■□□ 2.63
SMARCA4P51532 AC116562.4-201ENST00000641316 2276 ntBASIC31.48■■■□□ 2.63
SMARCA4P51532 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA4P51532 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC31.48■■■□□ 2.63
SMARCA4P51532 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC31.48■■■□□ 2.63
SMARCA4P51532 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA4P51532 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA4P51532 AC026120.1-201ENST00000611536 926 ntBASIC31.48■■■□□ 2.63
SMARCA4P51532 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC31.48■■■□□ 2.63
SMARCA4P51532 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC31.48■■■□□ 2.63
SMARCA4P51532 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA4P51532 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC31.48■■■□□ 2.63
SMARCA4P51532 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC31.48■■■□□ 2.63
SMARCA4P51532 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA4P51532 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms