Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 TPM4P1-201ENST00000436100 807 ntBASIC19.23■□□□□ 0.67
TNFSF9P41273 SAPCD2P3-201ENST00000455031 850 ntBASIC19.23■□□□□ 0.67
TNFSF9P41273 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFSF9P41273 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
TNFSF9P41273 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.23■□□□□ 0.67
TNFSF9P41273 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
TNFSF9P41273 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.23■□□□□ 0.67
TNFSF9P41273 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.23■□□□□ 0.67
TNFSF9P41273 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TNFSF9P41273 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
TNFSF9P41273 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TNFSF9P41273 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
TNFSF9P41273 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF9P41273 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TNFSF9P41273 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFSF9P41273 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF9P41273 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF9P41273 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF9P41273 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TNFSF9P41273 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
TNFSF9P41273 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TNFSF9P41273 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
TNFSF9P41273 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF9P41273 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF9P41273 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF9P41273 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF9P41273 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF9P41273 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.22■□□□□ 0.67
TNFSF9P41273 AC122714.2-201ENST00000502787 707 ntBASIC19.22■□□□□ 0.67
TNFSF9P41273 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF9P41273 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF9P41273 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF9P41273 AC006116.8-202ENST00000587620 1550 ntBASIC19.22■□□□□ 0.67
TNFSF9P41273 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF9P41273 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF9P41273 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TNFSF9P41273 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TNFSF9P41273 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF9P41273 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF9P41273 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
TNFSF9P41273 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TNFSF9P41273 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF9P41273 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF9P41273 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF9P41273 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF9P41273 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF9P41273 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF9P41273 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF9P41273 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
TNFSF9P41273 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF9P41273 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TNFSF9P41273 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.21■□□□□ 0.67
TNFSF9P41273 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF9P41273 ABCD1P5-201ENST00000445663 754 ntBASIC19.21■□□□□ 0.67
TNFSF9P41273 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.21■□□□□ 0.67
TNFSF9P41273 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.21■□□□□ 0.67
TNFSF9P41273 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF9P41273 AC104692.2-201ENST00000603054 253 ntBASIC19.21■□□□□ 0.67
TNFSF9P41273 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF9P41273 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF9P41273 AL133373.2-201ENST00000623187 2828 ntBASIC19.21■□□□□ 0.67
TNFSF9P41273 REXO1L11P-201ENST00000620964 1927 ntBASIC19.21■□□□□ 0.67
TNFSF9P41273 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF9P41273 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF9P41273 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TNFSF9P41273 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
TNFSF9P41273 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFSF9P41273 BX276092.7-203ENST00000637198 1536 ntBASIC19.2■□□□□ 0.66
TNFSF9P41273 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.2■□□□□ 0.66
TNFSF9P41273 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFSF9P41273 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF9P41273 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TNFSF9P41273 AP005117.1-201ENST00000584346 1413 ntBASIC19.2■□□□□ 0.66
TNFSF9P41273 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.2■□□□□ 0.66
TNFSF9P41273 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TNFSF9P41273 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.2■□□□□ 0.66
TNFSF9P41273 AC019129.2-201ENST00000609837 1235 ntBASIC19.2■□□□□ 0.66
TNFSF9P41273 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.2■□□□□ 0.66
TNFSF9P41273 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF9P41273 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF9P41273 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TNFSF9P41273 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF9P41273 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFSF9P41273 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF9P41273 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFSF9P41273 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms