Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 AL031598.1-201ENST00000561511 1773 ntBASIC22.54■■□□□ 1.2
ATP6V1AP38606 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ATP6V1AP38606 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ATP6V1AP38606 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC22.54■■□□□ 1.2
ATP6V1AP38606 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP6V1AP38606 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP6V1AP38606 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP6V1AP38606 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.54■■□□□ 1.2
ATP6V1AP38606 WDR53-203ENST00000429115 683 ntTSL 2 BASIC22.54■■□□□ 1.2
ATP6V1AP38606 FAM58CP-201ENST00000435741 640 ntBASIC22.54■■□□□ 1.2
ATP6V1AP38606 RHOQP3-201ENST00000437982 621 ntBASIC22.54■■□□□ 1.2
ATP6V1AP38606 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC22.54■■□□□ 1.2
ATP6V1AP38606 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
ATP6V1AP38606 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC22.54■■□□□ 1.2
ATP6V1AP38606 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
ATP6V1AP38606 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
ATP6V1AP38606 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.54■■□□□ 1.2
ATP6V1AP38606 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ATP6V1AP38606 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
ATP6V1AP38606 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
ATP6V1AP38606 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC22.53■■□□□ 1.2
ATP6V1AP38606 AC097637.2-201ENST00000624096 1997 ntBASIC22.53■■□□□ 1.2
ATP6V1AP38606 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 TSEN15P1-201ENST00000423257 515 ntBASIC22.53■■□□□ 1.2
ATP6V1AP38606 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC22.53■■□□□ 1.2
ATP6V1AP38606 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 STK19B-204ENST00000512515 211 ntBASIC22.53■■□□□ 1.2
ATP6V1AP38606 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.53■■□□□ 1.2
ATP6V1AP38606 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.53■■□□□ 1.2
ATP6V1AP38606 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.53■■□□□ 1.2
ATP6V1AP38606 AC025580.3-201ENST00000617932 1424 ntBASIC22.53■■□□□ 1.2
ATP6V1AP38606 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
ATP6V1AP38606 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATP6V1AP38606 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.52■■□□□ 1.2
ATP6V1AP38606 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 AC074386.1-202ENST00000463561 864 ntBASIC22.52■■□□□ 1.2
ATP6V1AP38606 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
ATP6V1AP38606 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
ATP6V1AP38606 AC011467.4-201ENST00000594891 528 ntBASIC22.52■■□□□ 1.2
ATP6V1AP38606 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
ATP6V1AP38606 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP6V1AP38606 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 AL139400.1-201ENST00000366220 510 ntBASIC22.51■■□□□ 1.19
ATP6V1AP38606 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 AP000344.2-201ENST00000512987 629 ntBASIC22.51■■□□□ 1.19
ATP6V1AP38606 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 STK25P1-201ENST00000585406 838 ntBASIC22.51■■□□□ 1.19
ATP6V1AP38606 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
ATP6V1AP38606 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP6V1AP38606 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ATP6V1AP38606 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ATP6V1AP38606 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ATP6V1AP38606 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.5■■□□□ 1.19
ATP6V1AP38606 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ATP6V1AP38606 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
ATP6V1AP38606 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ATP6V1AP38606 AP002414.1-201ENST00000391405 1147 ntBASIC22.5■■□□□ 1.19
ATP6V1AP38606 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.5■■□□□ 1.19
ATP6V1AP38606 ACTG1P14-201ENST00000446382 1122 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms