Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCNN1AP37088 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.48■□□□□ 0.55
SCNN1AP37088 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCNN1AP37088 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.48■□□□□ 0.55
SCNN1AP37088 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.47■□□□□ 0.55
SCNN1AP37088 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SCNN1AP37088 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SCNN1AP37088 AL353593.2-201ENST00000602529 1483 ntBASIC18.47■□□□□ 0.55
SCNN1AP37088 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.47■□□□□ 0.55
SCNN1AP37088 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 AC096582.2-201ENST00000510860 516 ntBASIC18.47■□□□□ 0.55
SCNN1AP37088 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.47■□□□□ 0.55
SCNN1AP37088 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.47■□□□□ 0.55
SCNN1AP37088 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.47■□□□□ 0.55
SCNN1AP37088 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.47■□□□□ 0.55
SCNN1AP37088 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SCNN1AP37088 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCNN1AP37088 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.47■□□□□ 0.55
SCNN1AP37088 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SCNN1AP37088 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.46■□□□□ 0.55
SCNN1AP37088 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
SCNN1AP37088 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.46■□□□□ 0.55
SCNN1AP37088 RCN1P2-201ENST00000398357 915 ntBASIC18.46■□□□□ 0.55
SCNN1AP37088 HCG4P8-203ENST00000443049 980 ntBASIC18.46■□□□□ 0.55
SCNN1AP37088 IGHV3-52-201ENST00000519770 353 ntBASIC18.46■□□□□ 0.55
SCNN1AP37088 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.46■□□□□ 0.55
SCNN1AP37088 AL139327.4-201ENST00000612362 153 ntBASIC18.46■□□□□ 0.55
SCNN1AP37088 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.46■□□□□ 0.55
SCNN1AP37088 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.46■□□□□ 0.55
SCNN1AP37088 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.46■□□□□ 0.55
SCNN1AP37088 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCNN1AP37088 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.46■□□□□ 0.54
SCNN1AP37088 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
SCNN1AP37088 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SCNN1AP37088 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.46■□□□□ 0.54
SCNN1AP37088 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCNN1AP37088 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCNN1AP37088 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCNN1AP37088 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCNN1AP37088 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
SCNN1AP37088 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCNN1AP37088 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCNN1AP37088 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCNN1AP37088 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SCNN1AP37088 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SCNN1AP37088 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCNN1AP37088 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCNN1AP37088 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.45■□□□□ 0.54
SCNN1AP37088 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.45■□□□□ 0.54
SCNN1AP37088 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
SCNN1AP37088 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.45■□□□□ 0.54
SCNN1AP37088 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SCNN1AP37088 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.45■□□□□ 0.54
SCNN1AP37088 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.45■□□□□ 0.54
SCNN1AP37088 AC111152.3-201ENST00000569699 673 ntBASIC18.45■□□□□ 0.54
SCNN1AP37088 AC099336.1-202ENST00000602961 463 ntBASIC18.45■□□□□ 0.54
SCNN1AP37088 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.45■□□□□ 0.54
SCNN1AP37088 AD001527.2-201ENST00000622994 785 ntBASIC18.45■□□□□ 0.54
SCNN1AP37088 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SCNN1AP37088 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCNN1AP37088 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SCNN1AP37088 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SCNN1AP37088 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.45■□□□□ 0.54
SCNN1AP37088 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.45■□□□□ 0.54
SCNN1AP37088 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCNN1AP37088 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCNN1AP37088 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.44■□□□□ 0.54
SCNN1AP37088 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.44■□□□□ 0.54
SCNN1AP37088 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCNN1AP37088 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCNN1AP37088 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SCNN1AP37088 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.44■□□□□ 0.54
SCNN1AP37088 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCNN1AP37088 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms