Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 KRT18P28-201ENST00000453838 1332 ntBASIC23.85■■□□□ 1.41
USP6P35125 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
USP6P35125 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC23.85■■□□□ 1.41
USP6P35125 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.85■■□□□ 1.41
USP6P35125 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.85■■□□□ 1.41
USP6P35125 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP6P35125 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP6P35125 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
USP6P35125 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.85■■□□□ 1.41
USP6P35125 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP6P35125 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP6P35125 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC23.84■■□□□ 1.41
USP6P35125 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC23.84■■□□□ 1.41
USP6P35125 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
USP6P35125 PUS1-205ENST00000535067 838 ntTSL 3 BASIC23.84■■□□□ 1.41
USP6P35125 CD63-210ENST00000550776 870 ntTSL 5 BASIC23.84■■□□□ 1.41
USP6P35125 AC096734.2-201ENST00000562054 433 ntBASIC23.84■■□□□ 1.41
USP6P35125 RPS15-207ENST00000591032 550 ntTSL 3 BASIC23.84■■□□□ 1.41
USP6P35125 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC23.84■■□□□ 1.41
USP6P35125 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP6P35125 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC23.84■■□□□ 1.41
USP6P35125 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
USP6P35125 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP6P35125 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP6P35125 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC23.84■■□□□ 1.41
USP6P35125 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
USP6P35125 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
USP6P35125 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP6P35125 ACTG1P4-201ENST00000425123 1122 ntBASIC23.84■■□□□ 1.41
USP6P35125 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP6P35125 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC23.84■■□□□ 1.41
USP6P35125 RFPL4AP1-201ENST00000530883 850 ntBASIC23.84■■□□□ 1.41
USP6P35125 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC23.84■■□□□ 1.41
USP6P35125 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC23.84■■□□□ 1.41
USP6P35125 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP6P35125 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC23.83■■□□□ 1.41
USP6P35125 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
USP6P35125 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP6P35125 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP6P35125 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC23.83■■□□□ 1.41
USP6P35125 REXO1L9P-201ENST00000604264 2108 ntBASIC23.83■■□□□ 1.41
USP6P35125 AP000997.3-201ENST00000623333 2250 ntBASIC23.83■■□□□ 1.41
USP6P35125 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC23.83■■□□□ 1.41
USP6P35125 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP6P35125 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
USP6P35125 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
USP6P35125 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.4
USP6P35125 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.83■■□□□ 1.4
USP6P35125 AC004877.2-201ENST00000623941 599 ntBASIC23.83■■□□□ 1.4
USP6P35125 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
USP6P35125 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.83■■□□□ 1.4
USP6P35125 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC23.82■■□□□ 1.4
USP6P35125 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
USP6P35125 AL020996.1-203ENST00000536896 2307 ntBASIC23.82■■□□□ 1.4
USP6P35125 PKD1P6-201ENST00000343738 4769 ntBASIC23.82■■□□□ 1.4
USP6P35125 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP6P35125 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP6P35125 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP6P35125 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC23.82■■□□□ 1.4
USP6P35125 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
USP6P35125 CD82-202ENST00000342935 967 ntTSL 5 BASIC23.82■■□□□ 1.4
USP6P35125 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.82■■□□□ 1.4
USP6P35125 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.82■■□□□ 1.4
USP6P35125 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.82■■□□□ 1.4
USP6P35125 AL031432.2-201ENST00000566714 459 ntBASIC23.82■■□□□ 1.4
USP6P35125 AL928711.1-201ENST00000570165 459 ntBASIC23.82■■□□□ 1.4
USP6P35125 GGTLC5P-201ENST00000617623 998 ntBASIC23.82■■□□□ 1.4
USP6P35125 AQP6-205ENST00000618286 829 ntTSL 5 BASIC23.82■■□□□ 1.4
USP6P35125 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.82■■□□□ 1.4
USP6P35125 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
USP6P35125 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP6P35125 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP6P35125 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC23.81■■□□□ 1.4
USP6P35125 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP6P35125 AC093503.3-201ENST00000624917 2352 ntBASIC23.81■■□□□ 1.4
USP6P35125 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP6P35125 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP6P35125 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP6P35125 MYCLP1-201ENST00000372451 1075 ntBASIC23.81■■□□□ 1.4
USP6P35125 CNN2P11-201ENST00000429351 262 ntBASIC23.81■■□□□ 1.4
USP6P35125 CYMP-203ENST00000474680 1263 ntBASIC23.81■■□□□ 1.4
USP6P35125 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC23.81■■□□□ 1.4
USP6P35125 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC23.81■■□□□ 1.4
USP6P35125 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC23.81■■□□□ 1.4
USP6P35125 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC23.81■■□□□ 1.4
USP6P35125 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP6P35125 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP6P35125 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP6P35125 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
USP6P35125 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
USP6P35125 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP6P35125 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.81■■□□□ 1.4
USP6P35125 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
USP6P35125 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP6P35125 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP6P35125 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP6P35125 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC23.8■■□□□ 1.4
USP6P35125 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
USP6P35125 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP6P35125 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms