Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHRNA3P32297 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRNA3P32297 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRNA3P32297 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA3P32297 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA3P32297 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA3P32297 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA3P32297 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRNA3P32297 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA3P32297 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA3P32297 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA3P32297 UPK3BP1-201ENST00000428678 509 ntBASIC18.77■□□□□ 0.6
CHRNA3P32297 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA3P32297 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRNA3P32297 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.77■□□□□ 0.6
CHRNA3P32297 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CHRNA3P32297 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRNA3P32297 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRNA3P32297 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.77■□□□□ 0.6
CHRNA3P32297 AC010240.3-201ENST00000607688 395 ntBASIC18.77■□□□□ 0.6
CHRNA3P32297 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRNA3P32297 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA3P32297 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRNA3P32297 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CHRNA3P32297 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA3P32297 IER3-202ENST00000376377 1350 ntBASIC18.77■□□□□ 0.6
CHRNA3P32297 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHRNA3P32297 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
CHRNA3P32297 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA3P32297 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.77■□□□□ 0.59
CHRNA3P32297 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.77■□□□□ 0.59
CHRNA3P32297 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CHRNA3P32297 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA3P32297 AL138688.1-201ENST00000624851 1594 ntBASIC18.76■□□□□ 0.59
CHRNA3P32297 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRNA3P32297 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA3P32297 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA3P32297 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA3P32297 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA3P32297 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA3P32297 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHRNA3P32297 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA3P32297 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA3P32297 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA3P32297 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRNA3P32297 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.76■□□□□ 0.59
CHRNA3P32297 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA3P32297 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRNA3P32297 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA3P32297 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRNA3P32297 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRNA3P32297 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CHRNA3P32297 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHRNA3P32297 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA3P32297 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CHRNA3P32297 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA3P32297 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHRNA3P32297 AC133963.1-201ENST00000504166 1679 ntBASIC18.76■□□□□ 0.59
CHRNA3P32297 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CHRNA3P32297 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA3P32297 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CHRNA3P32297 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHRNA3P32297 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRNA3P32297 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CHRNA3P32297 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNA3P32297 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA3P32297 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA3P32297 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA3P32297 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA3P32297 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA3P32297 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA3P32297 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRNA3P32297 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRNA3P32297 SPDYE13P-201ENST00000445314 798 ntBASIC18.75■□□□□ 0.59
CHRNA3P32297 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRNA3P32297 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNA3P32297 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHRNA3P32297 AC116407.4-201ENST00000623319 1061 ntBASIC18.75■□□□□ 0.59
CHRNA3P32297 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRNA3P32297 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNA3P32297 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRNA3P32297 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA3P32297 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA3P32297 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA3P32297 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA3P32297 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA3P32297 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA3P32297 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA3P32297 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CHRNA3P32297 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA3P32297 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA3P32297 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms