Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXA6P31267 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HOXA6P31267 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA6P31267 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA6P31267 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA6P31267 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXA6P31267 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HOXA6P31267 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA6P31267 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.45■□□□□ 0.38
HOXA6P31267 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HOXA6P31267 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA6P31267 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HOXA6P31267 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA6P31267 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HOXA6P31267 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HOXA6P31267 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXA6P31267 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXA6P31267 BX276092.7-203ENST00000637198 1536 ntBASIC17.44■□□□□ 0.38
HOXA6P31267 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXA6P31267 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXA6P31267 AC067863.1-201ENST00000494933 530 ntBASIC17.44■□□□□ 0.38
HOXA6P31267 AC109322.1-201ENST00000524499 1264 ntBASIC17.44■□□□□ 0.38
HOXA6P31267 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.44■□□□□ 0.38
HOXA6P31267 AC190387.1-201ENST00000551683 408 ntBASIC17.44■□□□□ 0.38
HOXA6P31267 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.44■□□□□ 0.38
HOXA6P31267 AC005498.2-205ENST00000593218 784 ntBASIC17.44■□□□□ 0.38
HOXA6P31267 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXA6P31267 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXA6P31267 LINC00628-201ENST00000628516 1289 ntBASIC17.44■□□□□ 0.38
HOXA6P31267 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXA6P31267 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXA6P31267 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXA6P31267 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXA6P31267 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXA6P31267 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA6P31267 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HOXA6P31267 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXA6P31267 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HOXA6P31267 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.43■□□□□ 0.38
HOXA6P31267 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HOXA6P31267 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
HOXA6P31267 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXA6P31267 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXA6P31267 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXA6P31267 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXA6P31267 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.43■□□□□ 0.38
HOXA6P31267 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXA6P31267 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.43■□□□□ 0.38
HOXA6P31267 AC112191.1-201ENST00000523689 701 ntBASIC17.43■□□□□ 0.38
HOXA6P31267 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXA6P31267 MIR4745-201ENST00000577608 62 ntBASIC17.43■□□□□ 0.38
HOXA6P31267 AJ011932.1-201ENST00000621707 465 ntBASIC17.43■□□□□ 0.38
HOXA6P31267 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXA6P31267 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXA6P31267 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXA6P31267 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HOXA6P31267 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXA6P31267 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXA6P31267 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXA6P31267 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXA6P31267 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HOXA6P31267 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXA6P31267 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXA6P31267 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXA6P31267 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HOXA6P31267 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXA6P31267 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXA6P31267 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXA6P31267 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXA6P31267 MYCLP1-201ENST00000372451 1075 ntBASIC17.42■□□□□ 0.38
HOXA6P31267 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXA6P31267 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.42■□□□□ 0.38
HOXA6P31267 ACTG1P4-201ENST00000425123 1122 ntBASIC17.42■□□□□ 0.38
HOXA6P31267 FAM86GP-201ENST00000448322 971 ntBASIC17.42■□□□□ 0.38
HOXA6P31267 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXA6P31267 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXA6P31267 AC002558.1-201ENST00000488906 803 ntBASIC17.42■□□□□ 0.38
HOXA6P31267 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXA6P31267 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXA6P31267 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXA6P31267 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXA6P31267 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXA6P31267 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXA6P31267 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
HOXA6P31267 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms