Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TM4SF1P30408 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TM4SF1P30408 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TM4SF1P30408 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TM4SF1P30408 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TM4SF1P30408 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TM4SF1P30408 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.95■■□□□ 1.1
TM4SF1P30408 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TM4SF1P30408 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.95■■□□□ 1.1
TM4SF1P30408 CXCL1P1-201ENST00000502804 216 ntBASIC21.95■■□□□ 1.1
TM4SF1P30408 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.95■■□□□ 1.1
TM4SF1P30408 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.95■■□□□ 1.1
TM4SF1P30408 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.95■■□□□ 1.1
TM4SF1P30408 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TM4SF1P30408 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
TM4SF1P30408 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.95■■□□□ 1.1
TM4SF1P30408 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TM4SF1P30408 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.95■■□□□ 1.1
TM4SF1P30408 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.95■■□□□ 1.1
TM4SF1P30408 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.95■■□□□ 1.1
TM4SF1P30408 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TM4SF1P30408 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.95■■□□□ 1.1
TM4SF1P30408 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TM4SF1P30408 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.95■■□□□ 1.1
TM4SF1P30408 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TM4SF1P30408 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
TM4SF1P30408 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.94■■□□□ 1.1
TM4SF1P30408 WBP2-203ENST00000433525 928 ntTSL 2 BASIC21.94■■□□□ 1.1
TM4SF1P30408 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.94■■□□□ 1.1
TM4SF1P30408 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.94■■□□□ 1.1
TM4SF1P30408 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.94■■□□□ 1.1
TM4SF1P30408 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.94■■□□□ 1.1
TM4SF1P30408 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.94■■□□□ 1.1
TM4SF1P30408 AC025678.2-201ENST00000562061 970 ntBASIC21.94■■□□□ 1.1
TM4SF1P30408 AC138761.1-201ENST00000584393 385 ntBASIC21.94■■□□□ 1.1
TM4SF1P30408 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.94■■□□□ 1.1
TM4SF1P30408 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.94■■□□□ 1.1
TM4SF1P30408 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.94■■□□□ 1.1
TM4SF1P30408 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.94■■□□□ 1.1
TM4SF1P30408 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.94■■□□□ 1.1
TM4SF1P30408 AC073592.3-201ENST00000625118 1834 ntBASIC21.94■■□□□ 1.1
TM4SF1P30408 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TM4SF1P30408 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM4SF1P30408 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TM4SF1P30408 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TM4SF1P30408 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TM4SF1P30408 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TM4SF1P30408 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TM4SF1P30408 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.93■■□□□ 1.1
TM4SF1P30408 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
TM4SF1P30408 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.93■■□□□ 1.1
TM4SF1P30408 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.93■■□□□ 1.1
TM4SF1P30408 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.93■■□□□ 1.1
TM4SF1P30408 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.93■■□□□ 1.1
TM4SF1P30408 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.93■■□□□ 1.1
TM4SF1P30408 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.93■■□□□ 1.1
TM4SF1P30408 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TM4SF1P30408 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TM4SF1P30408 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.93■■□□□ 1.1
TM4SF1P30408 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
TM4SF1P30408 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TM4SF1P30408 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TM4SF1P30408 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TM4SF1P30408 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
TM4SF1P30408 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TM4SF1P30408 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM4SF1P30408 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TM4SF1P30408 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM4SF1P30408 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM4SF1P30408 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.92■■□□□ 1.1
TM4SF1P30408 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.92■■□□□ 1.1
TM4SF1P30408 FAM185BP-201ENST00000443595 716 ntBASIC21.92■■□□□ 1.1
TM4SF1P30408 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
TM4SF1P30408 AC068137.2-201ENST00000605408 478 ntBASIC21.92■■□□□ 1.1
TM4SF1P30408 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.92■■□□□ 1.1
TM4SF1P30408 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TM4SF1P30408 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
TM4SF1P30408 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM4SF1P30408 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.92■■□□□ 1.1
TM4SF1P30408 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM4SF1P30408 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TM4SF1P30408 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TM4SF1P30408 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TM4SF1P30408 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TM4SF1P30408 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TM4SF1P30408 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TM4SF1P30408 ADH5P3-201ENST00000433842 1137 ntBASIC21.91■■□□□ 1.1
TM4SF1P30408 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.91■■□□□ 1.1
TM4SF1P30408 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms