Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.33■□□□□ 0.36
EPHA3P29320 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHA3P29320 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
EPHA3P29320 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EPHA3P29320 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EPHA3P29320 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.32■□□□□ 0.36
EPHA3P29320 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
EPHA3P29320 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.32■□□□□ 0.36
EPHA3P29320 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EPHA3P29320 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 AC007663.1-201ENST00000438948 1240 ntBASIC17.32■□□□□ 0.36
EPHA3P29320 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.32■□□□□ 0.36
EPHA3P29320 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 CCR12P-201ENST00000446203 998 ntBASIC17.32■□□□□ 0.36
EPHA3P29320 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 FAM201B-201ENST00000458407 597 ntBASIC17.32■□□□□ 0.36
EPHA3P29320 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.32■□□□□ 0.36
EPHA3P29320 AP003071.4-201ENST00000562276 1284 ntBASIC17.32■□□□□ 0.36
EPHA3P29320 AC142381.4-202ENST00000563973 229 ntBASIC17.32■□□□□ 0.36
EPHA3P29320 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.32■□□□□ 0.36
EPHA3P29320 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EPHA3P29320 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
EPHA3P29320 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 AC008894.3-201ENST00000624324 3103 ntBASIC17.32■□□□□ 0.36
EPHA3P29320 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EPHA3P29320 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.32■□□□□ 0.36
EPHA3P29320 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
EPHA3P29320 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.32■□□□□ 0.36
EPHA3P29320 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.32■□□□□ 0.36
EPHA3P29320 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHA3P29320 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.31■□□□□ 0.36
EPHA3P29320 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.31■□□□□ 0.36
EPHA3P29320 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
EPHA3P29320 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.31■□□□□ 0.36
EPHA3P29320 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
EPHA3P29320 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.31■□□□□ 0.36
EPHA3P29320 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 PRORSD1P-201ENST00000295112 541 ntBASIC17.31■□□□□ 0.36
EPHA3P29320 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.31■□□□□ 0.36
EPHA3P29320 SEC1P-202ENST00000473944 940 ntBASIC17.31■□□□□ 0.36
EPHA3P29320 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.31■□□□□ 0.36
EPHA3P29320 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.31■□□□□ 0.36
EPHA3P29320 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.31■□□□□ 0.36
EPHA3P29320 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.31■□□□□ 0.36
EPHA3P29320 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.31■□□□□ 0.36
EPHA3P29320 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.31■□□□□ 0.36
EPHA3P29320 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EPHA3P29320 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
EPHA3P29320 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EPHA3P29320 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
EPHA3P29320 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
EPHA3P29320 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
EPHA3P29320 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.3■□□□□ 0.36
EPHA3P29320 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.3■□□□□ 0.36
EPHA3P29320 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
EPHA3P29320 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
EPHA3P29320 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
EPHA3P29320 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EPHA3P29320 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
EPHA3P29320 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.3■□□□□ 0.36
EPHA3P29320 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms