Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTGFP29279 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CTGFP29279 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.9■□□□□ 0.78
CTGFP29279 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CTGFP29279 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.9■□□□□ 0.78
CTGFP29279 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CTGFP29279 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTGFP29279 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.9■□□□□ 0.78
CTGFP29279 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTGFP29279 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.9■□□□□ 0.78
CTGFP29279 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.9■□□□□ 0.78
CTGFP29279 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.9■□□□□ 0.78
CTGFP29279 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.9■□□□□ 0.78
CTGFP29279 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTGFP29279 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CTGFP29279 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.9■□□□□ 0.78
CTGFP29279 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.9■□□□□ 0.78
CTGFP29279 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.9■□□□□ 0.78
CTGFP29279 AC009336.1-201ENST00000608941 1553 ntBASIC19.9■□□□□ 0.78
CTGFP29279 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTGFP29279 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTGFP29279 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CTGFP29279 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.9■□□□□ 0.78
CTGFP29279 PI4KAP1-204ENST00000612579 1703 ntBASIC19.9■□□□□ 0.78
CTGFP29279 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTGFP29279 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
CTGFP29279 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTGFP29279 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTGFP29279 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTGFP29279 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTGFP29279 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CTGFP29279 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTGFP29279 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTGFP29279 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTGFP29279 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.89■□□□□ 0.77
CTGFP29279 AC002472.2-201ENST00000442739 958 ntBASIC19.89■□□□□ 0.77
CTGFP29279 FAM185BP-201ENST00000443595 716 ntBASIC19.89■□□□□ 0.77
CTGFP29279 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.89■□□□□ 0.77
CTGFP29279 TIMM8BP1-201ENST00000452384 211 ntBASIC19.89■□□□□ 0.77
CTGFP29279 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.89■□□□□ 0.77
CTGFP29279 KRT8P48-201ENST00000515599 1220 ntBASIC19.89■□□□□ 0.77
CTGFP29279 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.89■□□□□ 0.77
CTGFP29279 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.89■□□□□ 0.77
CTGFP29279 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTGFP29279 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTGFP29279 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.89■□□□□ 0.77
CTGFP29279 RN7SL204P-201ENST00000582831 262 ntBASIC19.89■□□□□ 0.77
CTGFP29279 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.89■□□□□ 0.77
CTGFP29279 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.89■□□□□ 0.77
CTGFP29279 ACTL9-202ENST00000612068 1252 ntBASIC19.89■□□□□ 0.77
CTGFP29279 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CTGFP29279 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CTGFP29279 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTGFP29279 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.88■□□□□ 0.77
CTGFP29279 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTGFP29279 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.88■□□□□ 0.77
CTGFP29279 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.88■□□□□ 0.77
CTGFP29279 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTGFP29279 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.88■□□□□ 0.77
CTGFP29279 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTGFP29279 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.88■□□□□ 0.77
CTGFP29279 AC063926.2-201ENST00000623766 1308 ntBASIC19.88■□□□□ 0.77
CTGFP29279 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTGFP29279 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTGFP29279 PMS2P4-201ENST00000412466 1052 ntBASIC19.88■□□□□ 0.77
CTGFP29279 RNA5SP421-201ENST00000516864 134 ntBASIC19.88■□□□□ 0.77
CTGFP29279 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
CTGFP29279 AC012645.4-201ENST00000610691 1061 ntBASIC19.88■□□□□ 0.77
CTGFP29279 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.88■□□□□ 0.77
CTGFP29279 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTGFP29279 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTGFP29279 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CTGFP29279 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.88■□□□□ 0.77
CTGFP29279 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTGFP29279 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CTGFP29279 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.88■□□□□ 0.77
CTGFP29279 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTGFP29279 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTGFP29279 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.87■□□□□ 0.77
CTGFP29279 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTGFP29279 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CTGFP29279 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.87■□□□□ 0.77
CTGFP29279 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CTGFP29279 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.87■□□□□ 0.77
CTGFP29279 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.87■□□□□ 0.77
CTGFP29279 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.87■□□□□ 0.77
CTGFP29279 AC055876.3-201ENST00000431496 288 ntBASIC19.87■□□□□ 0.77
CTGFP29279 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.87■□□□□ 0.77
CTGFP29279 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.87■□□□□ 0.77
CTGFP29279 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.87■□□□□ 0.77
CTGFP29279 AC051619.7-201ENST00000568314 623 ntBASIC19.87■□□□□ 0.77
CTGFP29279 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.87■□□□□ 0.77
CTGFP29279 AC099522.2-201ENST00000607001 744 ntBASIC19.87■□□□□ 0.77
CTGFP29279 AC138649.4-201ENST00000612222 287 ntBASIC19.87■□□□□ 0.77
CTGFP29279 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.87■□□□□ 0.77
CTGFP29279 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTGFP29279 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTGFP29279 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.87■□□□□ 0.77
CTGFP29279 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTGFP29279 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms