Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.13■□□□□ 0.17
GDF1P27539 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.13■□□□□ 0.17
GDF1P27539 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
GDF1P27539 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.13■□□□□ 0.17
GDF1P27539 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.13■□□□□ 0.17
GDF1P27539 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GDF1P27539 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GDF1P27539 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.13■□□□□ 0.17
GDF1P27539 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GDF1P27539 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GDF1P27539 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF1P27539 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 AP000997.3-201ENST00000623333 2250 ntBASIC16.12■□□□□ 0.17
GDF1P27539 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
GDF1P27539 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.12■□□□□ 0.17
GDF1P27539 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.12■□□□□ 0.17
GDF1P27539 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.12■□□□□ 0.17
GDF1P27539 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDF1P27539 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.12■□□□□ 0.17
GDF1P27539 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
GDF1P27539 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.11■□□□□ 0.17
GDF1P27539 AC100803.2-201ENST00000562459 1963 ntBASIC16.11■□□□□ 0.17
GDF1P27539 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.11■□□□□ 0.17
GDF1P27539 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
GDF1P27539 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
GDF1P27539 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
GDF1P27539 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 AP002469.2-201ENST00000531724 424 ntBASIC16.11■□□□□ 0.17
GDF1P27539 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
GDF1P27539 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 MTDHP3-201ENST00000594186 672 ntBASIC16.11■□□□□ 0.17
GDF1P27539 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
GDF1P27539 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.11■□□□□ 0.17
GDF1P27539 AP001269.4-201ENST00000609611 512 ntBASIC16.11■□□□□ 0.17
GDF1P27539 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.11■□□□□ 0.17
GDF1P27539 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 AC010460.3-201ENST00000511359 1579 ntBASIC16.11■□□□□ 0.17
GDF1P27539 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.11■□□□□ 0.17
GDF1P27539 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.11■□□□□ 0.17
GDF1P27539 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.11■□□□□ 0.17
GDF1P27539 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.11■□□□□ 0.17
GDF1P27539 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
GDF1P27539 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF1P27539 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.1■□□□□ 0.17
GDF1P27539 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms