Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.39■□□□□ 0.69
RFX1P22670 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.39■□□□□ 0.69
RFX1P22670 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFX1P22670 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFX1P22670 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RFX1P22670 LINC00602-201ENST00000629776 2065 ntBASIC19.39■□□□□ 0.69
RFX1P22670 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.39■□□□□ 0.69
RFX1P22670 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFX1P22670 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFX1P22670 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
RFX1P22670 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
RFX1P22670 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
RFX1P22670 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.38■□□□□ 0.69
RFX1P22670 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RFX1P22670 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.38■□□□□ 0.69
RFX1P22670 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 HLA-F-220ENST00000434407 884 ntBASIC19.38■□□□□ 0.69
RFX1P22670 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.38■□□□□ 0.69
RFX1P22670 AP002383.4-201ENST00000442518 975 ntBASIC19.38■□□□□ 0.69
RFX1P22670 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RFX1P22670 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RFX1P22670 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 AL160237.2-201ENST00000556165 472 ntBASIC19.38■□□□□ 0.69
RFX1P22670 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.38■□□□□ 0.69
RFX1P22670 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.38■□□□□ 0.69
RFX1P22670 AC116407.2-201ENST00000613639 860 ntBASIC19.38■□□□□ 0.69
RFX1P22670 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 AC012317.2-201ENST00000623305 2251 ntBASIC19.38■□□□□ 0.69
RFX1P22670 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFX1P22670 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.37■□□□□ 0.69
RFX1P22670 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFX1P22670 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.37■□□□□ 0.69
RFX1P22670 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
RFX1P22670 AC090340.1-201ENST00000620778 4980 ntBASIC19.37■□□□□ 0.69
RFX1P22670 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RFX1P22670 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RFX1P22670 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFX1P22670 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFX1P22670 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFX1P22670 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RFX1P22670 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFX1P22670 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFX1P22670 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFX1P22670 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.37■□□□□ 0.69
RFX1P22670 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.37■□□□□ 0.69
RFX1P22670 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.37■□□□□ 0.69
RFX1P22670 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.37■□□□□ 0.69
RFX1P22670 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.37■□□□□ 0.69
RFX1P22670 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFX1P22670 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.37■□□□□ 0.69
RFX1P22670 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.37■□□□□ 0.69
RFX1P22670 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.37■□□□□ 0.69
RFX1P22670 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RFX1P22670 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
RFX1P22670 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.37■□□□□ 0.69
RFX1P22670 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFX1P22670 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.37■□□□□ 0.69
RFX1P22670 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RFX1P22670 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFX1P22670 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFX1P22670 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.36■□□□□ 0.69
RFX1P22670 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.36■□□□□ 0.69
RFX1P22670 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.36■□□□□ 0.69
RFX1P22670 TSPY22P-201ENST00000427496 604 ntBASIC19.36■□□□□ 0.69
RFX1P22670 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.36■□□□□ 0.69
RFX1P22670 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 FOSL1P1-201ENST00000511041 816 ntBASIC19.36■□□□□ 0.69
RFX1P22670 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.36■□□□□ 0.69
RFX1P22670 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 AC079602.3-201ENST00000623931 403 ntBASIC19.36■□□□□ 0.69
RFX1P22670 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.36■□□□□ 0.69
RFX1P22670 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
RFX1P22670 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFX1P22670 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.36■□□□□ 0.69
RFX1P22670 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.35■□□□□ 0.69
RFX1P22670 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms