Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5AP20339 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5AP20339 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5AP20339 PBX2P1-201ENST00000493219 1291 ntBASIC13.84□□□□□ -0.19
RAB5AP20339 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.84□□□□□ -0.19
RAB5AP20339 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RAB5AP20339 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB5AP20339 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5AP20339 AC124283.5-201ENST00000624661 1809 ntBASIC13.84□□□□□ -0.19
RAB5AP20339 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5AP20339 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5AP20339 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5AP20339 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5AP20339 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5AP20339 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RAB5AP20339 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5AP20339 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB5AP20339 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5AP20339 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
RAB5AP20339 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5AP20339 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5AP20339 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5AP20339 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
RAB5AP20339 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
RAB5AP20339 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RAB5AP20339 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5AP20339 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB5AP20339 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5AP20339 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB5AP20339 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.83□□□□□ -0.19
RAB5AP20339 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RAB5AP20339 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
RAB5AP20339 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.83□□□□□ -0.19
RAB5AP20339 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB5AP20339 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB5AP20339 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RAB5AP20339 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RAB5AP20339 NORAD-201ENST00000565493 5339 ntBASIC13.83□□□□□ -0.2
RAB5AP20339 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB5AP20339 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 AL009178.2-201ENST00000597278 2719 ntBASIC13.83□□□□□ -0.2
RAB5AP20339 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.83□□□□□ -0.2
RAB5AP20339 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.83□□□□□ -0.2
RAB5AP20339 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
RAB5AP20339 AC091305.1-201ENST00000479476 895 ntBASIC13.83□□□□□ -0.2
RAB5AP20339 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.83□□□□□ -0.2
RAB5AP20339 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.83□□□□□ -0.2
RAB5AP20339 AP001330.3-201ENST00000520123 633 ntBASIC13.83□□□□□ -0.2
RAB5AP20339 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB5AP20339 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB5AP20339 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB5AP20339 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB5AP20339 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB5AP20339 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
RAB5AP20339 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 CICP13-201ENST00000422015 2789 ntBASIC13.83□□□□□ -0.2
RAB5AP20339 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB5AP20339 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RAB5AP20339 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RAB5AP20339 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB5AP20339 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB5AP20339 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB5AP20339 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB5AP20339 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 CYP21A1P-202ENST00000354927 1481 ntBASIC13.82□□□□□ -0.2
RAB5AP20339 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
RAB5AP20339 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
RAB5AP20339 PHGDH-209ENST00000641074 1780 ntBASIC13.82□□□□□ -0.2
RAB5AP20339 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB5AP20339 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB5AP20339 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.82□□□□□ -0.2
RAB5AP20339 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB5AP20339 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RAB5AP20339 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB5AP20339 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RAB5AP20339 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms