Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFRSF1BP20333 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 KRT17P2-201ENST00000300992 1314 ntBASIC16.54■□□□□ 0.24
TNFRSF1BP20333 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 AC128688.1-201ENST00000487626 519 ntBASIC16.54■□□□□ 0.24
TNFRSF1BP20333 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 NAPSB-206ENST00000562112 1266 ntBASIC16.54■□□□□ 0.24
TNFRSF1BP20333 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 AC092865.7-201ENST00000641832 219 ntBASIC16.54■□□□□ 0.24
TNFRSF1BP20333 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 HLA-J-201ENST00000462773 1622 ntBASIC16.54■□□□□ 0.24
TNFRSF1BP20333 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFRSF1BP20333 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF1BP20333 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFRSF1BP20333 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms