Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.2■□□□□ 0.98
NCLP19338 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
NCLP19338 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NCLP19338 KRT8P50-201ENST00000562022 1438 ntBASIC21.2■□□□□ 0.98
NCLP19338 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCLP19338 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NCLP19338 CYP2D8P-201ENST00000433633 1490 ntBASIC21.2■□□□□ 0.98
NCLP19338 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
NCLP19338 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.19■□□□□ 0.98
NCLP19338 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NCLP19338 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.19■□□□□ 0.98
NCLP19338 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 AC034236.2-201ENST00000606662 1610 ntBASIC21.19■□□□□ 0.98
NCLP19338 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.19■□□□□ 0.98
NCLP19338 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NCLP19338 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.19■□□□□ 0.98
NCLP19338 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.19■□□□□ 0.98
NCLP19338 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.19■□□□□ 0.98
NCLP19338 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.19■□□□□ 0.98
NCLP19338 NAPSB-206ENST00000562112 1266 ntBASIC21.19■□□□□ 0.98
NCLP19338 SLC25A1P4-201ENST00000567977 778 ntBASIC21.19■□□□□ 0.98
NCLP19338 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
NCLP19338 AP000692.2-201ENST00000608391 879 ntBASIC21.19■□□□□ 0.98
NCLP19338 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NCLP19338 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.19■□□□□ 0.98
NCLP19338 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.19■□□□□ 0.98
NCLP19338 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.19■□□□□ 0.98
NCLP19338 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLP19338 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC21.18■□□□□ 0.98
NCLP19338 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.18■□□□□ 0.98
NCLP19338 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.18■□□□□ 0.98
NCLP19338 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.18■□□□□ 0.98
NCLP19338 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.18■□□□□ 0.98
NCLP19338 AC010947.1-201ENST00000623454 693 ntBASIC21.18■□□□□ 0.98
NCLP19338 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.18■□□□□ 0.98
NCLP19338 MST1L-201ENST00000442552 2185 ntBASIC21.18■□□□□ 0.98
NCLP19338 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.18■□□□□ 0.98
NCLP19338 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.18■□□□□ 0.98
NCLP19338 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NCLP19338 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NCLP19338 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.18■□□□□ 0.98
NCLP19338 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLP19338 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NCLP19338 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NCLP19338 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.17■□□□□ 0.98
NCLP19338 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NCLP19338 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.17■□□□□ 0.98
NCLP19338 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
NCLP19338 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.17■□□□□ 0.98
NCLP19338 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NCLP19338 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLP19338 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NCLP19338 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLP19338 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
NCLP19338 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCLP19338 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms