Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC172P0C7W6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CCDC172P0C7W6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC172P0C7W6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC172P0C7W6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC172P0C7W6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC172P0C7W6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC172P0C7W6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 RASA4DP-201ENST00000460726 1199 ntBASIC19.26■□□□□ 0.67
CCDC172P0C7W6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC172P0C7W6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.25■□□□□ 0.67
CCDC172P0C7W6 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 COX11P1-201ENST00000489116 835 ntBASIC19.25■□□□□ 0.67
CCDC172P0C7W6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC172P0C7W6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 AC100803.2-201ENST00000562459 1963 ntBASIC19.24■□□□□ 0.67
CCDC172P0C7W6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 SIRPAP1-201ENST00000448467 1770 ntBASIC19.24■□□□□ 0.67
CCDC172P0C7W6 AC133963.1-201ENST00000504166 1679 ntBASIC19.24■□□□□ 0.67
CCDC172P0C7W6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC172P0C7W6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC172P0C7W6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms