Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
THBS1P07996 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.39■□□□□ 0.21
THBS1P07996 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.39■□□□□ 0.21
THBS1P07996 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.39■□□□□ 0.21
THBS1P07996 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.39■□□□□ 0.21
THBS1P07996 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.38■□□□□ 0.21
THBS1P07996 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
THBS1P07996 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
THBS1P07996 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
THBS1P07996 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 LINC01311-201ENST00000565162 1445 ntBASIC16.38■□□□□ 0.21
THBS1P07996 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.38■□□□□ 0.21
THBS1P07996 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.38■□□□□ 0.21
THBS1P07996 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 MTCL1P1-201ENST00000446207 792 ntBASIC16.38■□□□□ 0.21
THBS1P07996 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.38■□□□□ 0.21
THBS1P07996 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.38■□□□□ 0.21
THBS1P07996 VENTXP5-201ENST00000523979 775 ntBASIC16.38■□□□□ 0.21
THBS1P07996 AL390719.2-201ENST00000606993 987 ntBASIC16.38■□□□□ 0.21
THBS1P07996 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
THBS1P07996 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.38■□□□□ 0.21
THBS1P07996 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.38■□□□□ 0.21
THBS1P07996 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
THBS1P07996 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.37■□□□□ 0.21
THBS1P07996 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.37■□□□□ 0.21
THBS1P07996 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
THBS1P07996 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.37■□□□□ 0.21
THBS1P07996 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.37■□□□□ 0.21
THBS1P07996 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.37■□□□□ 0.21
THBS1P07996 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.37■□□□□ 0.21
THBS1P07996 AC005104.2-201ENST00000427818 678 ntBASIC16.37■□□□□ 0.21
THBS1P07996 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.37■□□□□ 0.21
THBS1P07996 AC068472.1-201ENST00000474589 881 ntBASIC16.37■□□□□ 0.21
THBS1P07996 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 LINC01238-205ENST00000567549 1107 ntBASIC16.37■□□□□ 0.21
THBS1P07996 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.37■□□□□ 0.21
THBS1P07996 AC005332.3-201ENST00000589904 676 ntBASIC16.37■□□□□ 0.21
THBS1P07996 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.37■□□□□ 0.21
THBS1P07996 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.37■□□□□ 0.21
THBS1P07996 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.37■□□□□ 0.21
THBS1P07996 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.37■□□□□ 0.21
THBS1P07996 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.37■□□□□ 0.21
THBS1P07996 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.37■□□□□ 0.21
THBS1P07996 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
THBS1P07996 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
THBS1P07996 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
THBS1P07996 LTB4R2-202ENST00000528054 3092 ntBASIC16.37■□□□□ 0.21
THBS1P07996 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.37■□□□□ 0.21
THBS1P07996 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THBS1P07996 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.36■□□□□ 0.21
THBS1P07996 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
THBS1P07996 OR6D1P-202ENST00000641007 5290 ntBASIC16.36■□□□□ 0.21
THBS1P07996 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THBS1P07996 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
THBS1P07996 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
THBS1P07996 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
THBS1P07996 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THBS1P07996 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THBS1P07996 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
THBS1P07996 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
THBS1P07996 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
THBS1P07996 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
THBS1P07996 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms