Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN1P07384 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN1P07384 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN1P07384 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CAPN1P07384 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN1P07384 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN1P07384 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN1P07384 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CAPN1P07384 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.54■□□□□ 0.4
CAPN1P07384 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN1P07384 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.54■□□□□ 0.4
CAPN1P07384 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN1P07384 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CAPN1P07384 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPN1P07384 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN1P07384 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN1P07384 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CAPN1P07384 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN1P07384 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CAPN1P07384 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CAPN1P07384 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN1P07384 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 AL391807.1-203ENST00000604392 2365 ntBASIC17.53■□□□□ 0.4
CAPN1P07384 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN1P07384 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN1P07384 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN1P07384 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN1P07384 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN1P07384 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN1P07384 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.53■□□□□ 0.4
CAPN1P07384 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.53■□□□□ 0.4
CAPN1P07384 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CAPN1P07384 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.53■□□□□ 0.4
CAPN1P07384 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN1P07384 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN1P07384 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 OR6D1P-202ENST00000641007 5290 ntBASIC17.53■□□□□ 0.4
CAPN1P07384 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CAPN1P07384 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN1P07384 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CAPN1P07384 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN1P07384 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN1P07384 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CAPN1P07384 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN1P07384 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN1P07384 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CAPN1P07384 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN1P07384 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN1P07384 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN1P07384 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN1P07384 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN1P07384 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CAPN1P07384 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN1P07384 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN1P07384 MIR662-201ENST00000384847 95 ntBASIC17.52■□□□□ 0.4
CAPN1P07384 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.52■□□□□ 0.4
CAPN1P07384 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.52■□□□□ 0.4
CAPN1P07384 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN1P07384 AC011498.5-201ENST00000592027 486 ntBASIC17.52■□□□□ 0.4
CAPN1P07384 CLEC4GP1-201ENST00000596555 870 ntBASIC17.52■□□□□ 0.4
CAPN1P07384 AL136038.4-201ENST00000603606 1261 ntBASIC17.52■□□□□ 0.4
CAPN1P07384 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN1P07384 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN1P07384 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.52■□□□□ 0.4
CAPN1P07384 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.52■□□□□ 0.4
CAPN1P07384 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CAPN1P07384 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.52■□□□□ 0.4
CAPN1P07384 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CAPN1P07384 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN1P07384 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CAPN1P07384 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN1P07384 AC016734.2-201ENST00000624325 1377 ntBASIC17.52■□□□□ 0.39
CAPN1P07384 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN1P07384 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.52■□□□□ 0.39
CAPN1P07384 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.52■□□□□ 0.39
CAPN1P07384 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.52■□□□□ 0.39
CAPN1P07384 AC132938.6-201ENST00000623828 1655 ntBASIC17.52■□□□□ 0.39
CAPN1P07384 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN1P07384 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.51■□□□□ 0.39
CAPN1P07384 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms