Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQB2P05538 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.04■□□□□ 0.48
HLA-DQB2P05538 BX276092.7-203ENST00000637198 1536 ntBASIC18.04■□□□□ 0.48
HLA-DQB2P05538 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 ATP5G2P1-201ENST00000433580 426 ntBASIC18.04■□□□□ 0.48
HLA-DQB2P05538 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 VENTXP7-201ENST00000475503 772 ntBASIC18.04■□□□□ 0.48
HLA-DQB2P05538 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB2P05538 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 AC097374.2-201ENST00000618617 1306 ntBASIC18.03■□□□□ 0.48
HLA-DQB2P05538 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 UPK3BP1-201ENST00000428678 509 ntBASIC18.03■□□□□ 0.48
HLA-DQB2P05538 AC007967.3-201ENST00000434308 558 ntBASIC18.03■□□□□ 0.48
HLA-DQB2P05538 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB2P05538 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB2P05538 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQB2P05538 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQB2P05538 AC133963.1-201ENST00000504166 1679 ntBASIC18.02■□□□□ 0.47
HLA-DQB2P05538 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.47
HLA-DQB2P05538 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms