Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC012640.2-201ENST00000561606 901 ntBASIC19.94■□□□□ 0.78
GGPS1O95749 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 AD001527.2-201ENST00000622994 785 ntBASIC19.94■□□□□ 0.78
GGPS1O95749 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
GGPS1O95749 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.94■□□□□ 0.78
GGPS1O95749 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.94■□□□□ 0.78
GGPS1O95749 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.94■□□□□ 0.78
GGPS1O95749 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
GGPS1O95749 HLA-J-201ENST00000462773 1622 ntBASIC19.94■□□□□ 0.78
GGPS1O95749 AC079776.2-201ENST00000641154 1609 ntBASIC19.94■□□□□ 0.78
GGPS1O95749 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.94■□□□□ 0.78
GGPS1O95749 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GGPS1O95749 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GGPS1O95749 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GGPS1O95749 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GGPS1O95749 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GGPS1O95749 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.93■□□□□ 0.78
GGPS1O95749 COX5BP2-201ENST00000392354 334 ntBASIC19.93■□□□□ 0.78
GGPS1O95749 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GGPS1O95749 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.93■□□□□ 0.78
GGPS1O95749 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.93■□□□□ 0.78
GGPS1O95749 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GGPS1O95749 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GGPS1O95749 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GGPS1O95749 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GGPS1O95749 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
GGPS1O95749 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.93■□□□□ 0.78
GGPS1O95749 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GGPS1O95749 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.93■□□□□ 0.78
GGPS1O95749 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
GGPS1O95749 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GGPS1O95749 BICD1-207ENST00000551848 1962 ntBASIC19.92■□□□□ 0.78
GGPS1O95749 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.92■□□□□ 0.78
GGPS1O95749 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GGPS1O95749 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GGPS1O95749 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GGPS1O95749 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GGPS1O95749 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.92■□□□□ 0.78
GGPS1O95749 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.92■□□□□ 0.78
GGPS1O95749 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.92■□□□□ 0.78
GGPS1O95749 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
GGPS1O95749 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GGPS1O95749 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GGPS1O95749 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.92■□□□□ 0.78
GGPS1O95749 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GGPS1O95749 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
GGPS1O95749 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
GGPS1O95749 SIRPAP1-201ENST00000448467 1770 ntBASIC19.92■□□□□ 0.78
GGPS1O95749 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
GGPS1O95749 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
GGPS1O95749 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.92■□□□□ 0.78
GGPS1O95749 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.92■□□□□ 0.78
GGPS1O95749 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GGPS1O95749 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.92■□□□□ 0.78
GGPS1O95749 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GGPS1O95749 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.92■□□□□ 0.78
GGPS1O95749 AC100803.2-201ENST00000562459 1963 ntBASIC19.92■□□□□ 0.78
GGPS1O95749 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GGPS1O95749 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.92■□□□□ 0.78
GGPS1O95749 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
GGPS1O95749 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
GGPS1O95749 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
GGPS1O95749 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
GGPS1O95749 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.91■□□□□ 0.78
GGPS1O95749 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GGPS1O95749 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GGPS1O95749 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GGPS1O95749 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
GGPS1O95749 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GGPS1O95749 AC103564.2-201ENST00000432853 1299 ntBASIC19.91■□□□□ 0.78
GGPS1O95749 AC092910.1-201ENST00000482027 1129 ntBASIC19.91■□□□□ 0.78
GGPS1O95749 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.91■□□□□ 0.78
GGPS1O95749 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.91■□□□□ 0.78
GGPS1O95749 KRT18P58-201ENST00000527480 1120 ntBASIC19.91■□□□□ 0.78
GGPS1O95749 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.91■□□□□ 0.78
GGPS1O95749 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
GGPS1O95749 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
GGPS1O95749 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.91■□□□□ 0.78
GGPS1O95749 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.91■□□□□ 0.78
GGPS1O95749 AC008735.5-201ENST00000623544 497 ntBASIC19.91■□□□□ 0.78
GGPS1O95749 AC107918.4-202ENST00000641623 219 ntBASIC19.91■□□□□ 0.78
GGPS1O95749 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GGPS1O95749 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GGPS1O95749 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
GGPS1O95749 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
GGPS1O95749 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.91■□□□□ 0.78
GGPS1O95749 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.91■□□□□ 0.78
GGPS1O95749 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.91■□□□□ 0.78
GGPS1O95749 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GGPS1O95749 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.9■□□□□ 0.78
GGPS1O95749 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
GGPS1O95749 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GGPS1O95749 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms