Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC009113.1-201ENST00000570267 2443 ntBASIC27.54■■■□□ 2
PCF11O94913 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC27.54■■■□□ 2
PCF11O94913 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCF11O94913 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC27.53■■■□□ 2
PCF11O94913 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
PCF11O94913 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCF11O94913 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC27.53■■■□□ 2
PCF11O94913 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC27.53■■■□□ 2
PCF11O94913 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC27.53■■■□□ 2
PCF11O94913 COA5-202ENST00000409997 557 ntTSL 4 BASIC27.53■■■□□ 2
PCF11O94913 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC27.53■■■□□ 2
PCF11O94913 AL353135.1-201ENST00000606729 504 ntBASIC27.53■■■□□ 2
PCF11O94913 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
PCF11O94913 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
PCF11O94913 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCF11O94913 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCF11O94913 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
PCF11O94913 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
PCF11O94913 KRT18P55-202ENST00000578578 1546 ntBASIC27.53■■■□□ 2
PCF11O94913 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
PCF11O94913 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
PCF11O94913 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
PCF11O94913 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC27.52■■■□□ 2
PCF11O94913 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC27.52■■■□□ 2
PCF11O94913 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC27.52■■■□□ 2
PCF11O94913 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
PCF11O94913 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
PCF11O94913 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC27.52■■■□□ 2
PCF11O94913 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
PCF11O94913 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCF11O94913 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
PCF11O94913 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC27.52■■■□□ 2
PCF11O94913 AC116407.2-201ENST00000613639 860 ntBASIC27.52■■■□□ 2
PCF11O94913 AL513190.1-201ENST00000621254 727 ntBASIC27.52■■■□□ 2
PCF11O94913 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC27.52■■■□□ 2
PCF11O94913 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC27.51■■■□□ 2
PCF11O94913 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC27.51■■■□□ 2
PCF11O94913 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCF11O94913 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PCF11O94913 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC27.51■■□□□ 1.99
PCF11O94913 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCF11O94913 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PCF11O94913 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC27.51■■□□□ 1.99
PCF11O94913 ACTG1P4-201ENST00000425123 1122 ntBASIC27.51■■□□□ 1.99
PCF11O94913 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC27.51■■□□□ 1.99
PCF11O94913 SIGLEC30P-201ENST00000455569 941 ntBASIC27.51■■□□□ 1.99
PCF11O94913 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC27.51■■□□□ 1.99
PCF11O94913 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC27.51■■□□□ 1.99
PCF11O94913 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC27.51■■□□□ 1.99
PCF11O94913 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
PCF11O94913 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PCF11O94913 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCF11O94913 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCF11O94913 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PCF11O94913 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PCF11O94913 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC27.5■■□□□ 1.99
PCF11O94913 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC27.5■■□□□ 1.99
PCF11O94913 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC27.5■■□□□ 1.99
PCF11O94913 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PCF11O94913 POLD4-207ENST00000531239 584 ntTSL 2 BASIC27.5■■□□□ 1.99
PCF11O94913 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC27.5■■□□□ 1.99
PCF11O94913 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC27.5■■□□□ 1.99
PCF11O94913 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCF11O94913 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PCF11O94913 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC27.5■■□□□ 1.99
PCF11O94913 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCF11O94913 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC27.49■■□□□ 1.99
PCF11O94913 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
PCF11O94913 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC27.49■■□□□ 1.99
PCF11O94913 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC27.49■■□□□ 1.99
PCF11O94913 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC27.49■■□□□ 1.99
PCF11O94913 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC27.49■■□□□ 1.99
PCF11O94913 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCF11O94913 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
PCF11O94913 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCF11O94913 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
PCF11O94913 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC27.48■■□□□ 1.99
PCF11O94913 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC27.48■■□□□ 1.99
PCF11O94913 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC27.48■■□□□ 1.99
PCF11O94913 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC27.48■■□□□ 1.99
PCF11O94913 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC27.48■■□□□ 1.99
PCF11O94913 PRR29-209ENST00000582540 967 ntTSL 2 BASIC27.48■■□□□ 1.99
PCF11O94913 ORC5-208ENST00000626700 344 ntTSL 3 BASIC27.48■■□□□ 1.99
PCF11O94913 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCF11O94913 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCF11O94913 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC27.48■■□□□ 1.99
PCF11O94913 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC27.48■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms