Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PTP4A3O75365 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 AC008894.3-201ENST00000624324 3103 ntBASIC16.03■□□□□ 0.16
PTP4A3O75365 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.03■□□□□ 0.16
PTP4A3O75365 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTP4A3O75365 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.03■□□□□ 0.16
PTP4A3O75365 STARP1-201ENST00000397973 869 ntBASIC16.03■□□□□ 0.16
PTP4A3O75365 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.03■□□□□ 0.16
PTP4A3O75365 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.03■□□□□ 0.16
PTP4A3O75365 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.03■□□□□ 0.16
PTP4A3O75365 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 AC093827.2-201ENST00000512654 315 ntBASIC16.03■□□□□ 0.16
PTP4A3O75365 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.03■□□□□ 0.16
PTP4A3O75365 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.03■□□□□ 0.16
PTP4A3O75365 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.03■□□□□ 0.16
PTP4A3O75365 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.03■□□□□ 0.16
PTP4A3O75365 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PTP4A3O75365 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
PTP4A3O75365 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 AD000864.1-201ENST00000624076 2295 ntBASIC16.03■□□□□ 0.16
PTP4A3O75365 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.03■□□□□ 0.16
PTP4A3O75365 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PTP4A3O75365 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.03■□□□□ 0.16
PTP4A3O75365 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.03■□□□□ 0.16
PTP4A3O75365 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PTP4A3O75365 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.02■□□□□ 0.16
PTP4A3O75365 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PTP4A3O75365 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PTP4A3O75365 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.02■□□□□ 0.16
PTP4A3O75365 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PTP4A3O75365 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
PTP4A3O75365 TSPY12P-201ENST00000421279 868 ntBASIC16.02■□□□□ 0.16
PTP4A3O75365 SPDYE15P-201ENST00000424157 909 ntBASIC16.02■□□□□ 0.16
PTP4A3O75365 LIN28AP1-201ENST00000429574 405 ntBASIC16.02■□□□□ 0.16
PTP4A3O75365 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.02■□□□□ 0.16
PTP4A3O75365 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.02■□□□□ 0.16
PTP4A3O75365 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTP4A3O75365 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PTP4A3O75365 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTP4A3O75365 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTP4A3O75365 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.02■□□□□ 0.15
PTP4A3O75365 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTP4A3O75365 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.02■□□□□ 0.15
PTP4A3O75365 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTP4A3O75365 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTP4A3O75365 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTP4A3O75365 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PTP4A3O75365 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTP4A3O75365 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTP4A3O75365 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PTP4A3O75365 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTP4A3O75365 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTP4A3O75365 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTP4A3O75365 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTP4A3O75365 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTP4A3O75365 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTP4A3O75365 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTP4A3O75365 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTP4A3O75365 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.01■□□□□ 0.15
PTP4A3O75365 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTP4A3O75365 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTP4A3O75365 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.01■□□□□ 0.15
PTP4A3O75365 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.01■□□□□ 0.15
PTP4A3O75365 AC005104.2-201ENST00000427818 678 ntBASIC16.01■□□□□ 0.15
PTP4A3O75365 AC092597.1-201ENST00000487352 616 ntBASIC16.01■□□□□ 0.15
PTP4A3O75365 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTP4A3O75365 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.01■□□□□ 0.15
PTP4A3O75365 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTP4A3O75365 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms