Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZNF253O75346 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF253O75346 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
ZNF253O75346 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF253O75346 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 AC068587.6-202ENST00000641839 5619 ntBASIC13.9□□□□□ -0.18
ZNF253O75346 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
ZNF253O75346 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
ZNF253O75346 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF253O75346 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF253O75346 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF253O75346 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF253O75346 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
ZNF253O75346 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
ZNF253O75346 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ZNF253O75346 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 AC036111.1-201ENST00000533973 1582 ntBASIC13.89□□□□□ -0.19
ZNF253O75346 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF253O75346 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ZNF253O75346 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
ZNF253O75346 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
ZNF253O75346 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.89□□□□□ -0.19
ZNF253O75346 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.89□□□□□ -0.19
ZNF253O75346 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.89□□□□□ -0.19
ZNF253O75346 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.89□□□□□ -0.19
ZNF253O75346 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.89□□□□□ -0.19
ZNF253O75346 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.89□□□□□ -0.19
ZNF253O75346 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.89□□□□□ -0.19
ZNF253O75346 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.89□□□□□ -0.19
ZNF253O75346 SDHAP2-201ENST00000455183 2001 ntBASIC13.89□□□□□ -0.19
ZNF253O75346 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 AC093010.1-201ENST00000473625 1624 ntBASIC13.89□□□□□ -0.19
ZNF253O75346 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF253O75346 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 KRT18P55-202ENST00000578578 1546 ntBASIC13.89□□□□□ -0.19
ZNF253O75346 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF253O75346 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF253O75346 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF253O75346 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF253O75346 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.88□□□□□ -0.19
ZNF253O75346 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF253O75346 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ZNF253O75346 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF253O75346 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF253O75346 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
ZNF253O75346 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF253O75346 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.88□□□□□ -0.19
ZNF253O75346 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.88□□□□□ -0.19
ZNF253O75346 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF253O75346 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF253O75346 SLC25A1P4-201ENST00000567977 778 ntBASIC13.88□□□□□ -0.19
ZNF253O75346 MIR3180-4-201ENST00000582223 153 ntBASIC13.88□□□□□ -0.19
ZNF253O75346 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF253O75346 CD177P1-201ENST00000606252 935 ntBASIC13.88□□□□□ -0.19
ZNF253O75346 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms