Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GADD45BO75293 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GADD45BO75293 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GADD45BO75293 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
GADD45BO75293 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
GADD45BO75293 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.37■□□□□ 0.85
GADD45BO75293 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GADD45BO75293 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.37■□□□□ 0.85
GADD45BO75293 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.36■□□□□ 0.85
GADD45BO75293 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GADD45BO75293 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.36■□□□□ 0.85
GADD45BO75293 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.36■□□□□ 0.85
GADD45BO75293 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
GADD45BO75293 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.36■□□□□ 0.85
GADD45BO75293 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
GADD45BO75293 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.36■□□□□ 0.85
GADD45BO75293 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GADD45BO75293 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.36■□□□□ 0.85
GADD45BO75293 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GADD45BO75293 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.36■□□□□ 0.85
GADD45BO75293 AC009947.2-201ENST00000444014 672 ntBASIC20.36■□□□□ 0.85
GADD45BO75293 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
GADD45BO75293 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.36■□□□□ 0.85
GADD45BO75293 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.36■□□□□ 0.85
GADD45BO75293 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.36■□□□□ 0.85
GADD45BO75293 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
GADD45BO75293 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GADD45BO75293 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
GADD45BO75293 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GADD45BO75293 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GADD45BO75293 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GADD45BO75293 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GADD45BO75293 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.36■□□□□ 0.85
GADD45BO75293 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GADD45BO75293 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
GADD45BO75293 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
GADD45BO75293 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
GADD45BO75293 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GADD45BO75293 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GADD45BO75293 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GADD45BO75293 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.35■□□□□ 0.85
GADD45BO75293 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GADD45BO75293 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.35■□□□□ 0.85
GADD45BO75293 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.35■□□□□ 0.85
GADD45BO75293 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GADD45BO75293 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GADD45BO75293 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
GADD45BO75293 TSPY7P-201ENST00000431358 1114 ntBASIC20.35■□□□□ 0.85
GADD45BO75293 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.35■□□□□ 0.85
GADD45BO75293 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
GADD45BO75293 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.35■□□□□ 0.85
GADD45BO75293 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.35■□□□□ 0.85
GADD45BO75293 MIR3917-201ENST00000580971 93 ntBASIC20.35■□□□□ 0.85
GADD45BO75293 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.35■□□□□ 0.85
GADD45BO75293 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.35■□□□□ 0.85
GADD45BO75293 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GADD45BO75293 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.35■□□□□ 0.85
GADD45BO75293 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.35■□□□□ 0.85
GADD45BO75293 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
GADD45BO75293 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GADD45BO75293 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.35■□□□□ 0.85
GADD45BO75293 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.35■□□□□ 0.85
GADD45BO75293 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GADD45BO75293 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
GADD45BO75293 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GADD45BO75293 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
GADD45BO75293 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.34■□□□□ 0.85
GADD45BO75293 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
GADD45BO75293 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
GADD45BO75293 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
GADD45BO75293 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
GADD45BO75293 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.34■□□□□ 0.85
GADD45BO75293 LYSMD4-203ENST00000378904 2122 ntBASIC20.34■□□□□ 0.85
GADD45BO75293 MIR1238-201ENST00000408483 83 ntBASIC20.34■□□□□ 0.85
GADD45BO75293 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 AL157888.1-201ENST00000631930 593 ntBASIC20.34■□□□□ 0.85
GADD45BO75293 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
GADD45BO75293 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
GADD45BO75293 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.34■□□□□ 0.85
GADD45BO75293 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
GADD45BO75293 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
GADD45BO75293 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
GADD45BO75293 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
GADD45BO75293 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms