Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSX4O60224 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.19■□□□□ 0.18
SSX4O60224 KRT8P41-201ENST00000533985 1514 ntBASIC16.19■□□□□ 0.18
SSX4O60224 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX4O60224 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.19■□□□□ 0.18
SSX4O60224 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SSX4O60224 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SSX4O60224 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SSX4O60224 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SSX4O60224 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SSX4O60224 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX4O60224 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX4O60224 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SSX4O60224 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SSX4O60224 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SSX4O60224 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 HOMER2P1-201ENST00000455653 964 ntBASIC16.18■□□□□ 0.18
SSX4O60224 AL359075.1-203ENST00000462729 1002 ntBASIC16.18■□□□□ 0.18
SSX4O60224 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.18■□□□□ 0.18
SSX4O60224 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.18■□□□□ 0.18
SSX4O60224 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX4O60224 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX4O60224 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.18■□□□□ 0.18
SSX4O60224 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.18■□□□□ 0.18
SSX4O60224 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX4O60224 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
SSX4O60224 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
SSX4O60224 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SSX4O60224 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX4O60224 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.18■□□□□ 0.18
SSX4O60224 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX4O60224 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SSX4O60224 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.18■□□□□ 0.18
SSX4O60224 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.17■□□□□ 0.18
SSX4O60224 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 AL513477.1-201ENST00000602865 2407 ntBASIC16.17■□□□□ 0.18
SSX4O60224 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.17■□□□□ 0.18
SSX4O60224 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.17■□□□□ 0.18
SSX4O60224 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.17■□□□□ 0.18
SSX4O60224 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.17■□□□□ 0.18
SSX4O60224 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.17■□□□□ 0.18
SSX4O60224 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.17■□□□□ 0.18
SSX4O60224 AP000550.4-202ENST00000639755 178 ntBASIC16.17■□□□□ 0.18
SSX4O60224 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SSX4O60224 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SSX4O60224 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX4O60224 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SSX4O60224 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.17■□□□□ 0.18
SSX4O60224 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SSX4O60224 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX4O60224 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX4O60224 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX4O60224 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX4O60224 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSX4O60224 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.16■□□□□ 0.18
SSX4O60224 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX4O60224 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SSX4O60224 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX4O60224 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX4O60224 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX4O60224 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX4O60224 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.16■□□□□ 0.18
SSX4O60224 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX4O60224 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.16■□□□□ 0.18
SSX4O60224 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms