Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD6O43541 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD6O43541 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SMAD6O43541 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SMAD6O43541 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.95■□□□□ 0.46
SMAD6O43541 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SMAD6O43541 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SMAD6O43541 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
SMAD6O43541 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.95■□□□□ 0.46
SMAD6O43541 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.95■□□□□ 0.46
SMAD6O43541 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SMAD6O43541 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.95■□□□□ 0.46
SMAD6O43541 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SMAD6O43541 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.95■□□□□ 0.46
SMAD6O43541 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.95■□□□□ 0.46
SMAD6O43541 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.95■□□□□ 0.46
SMAD6O43541 AD001527.2-201ENST00000622994 785 ntBASIC17.95■□□□□ 0.46
SMAD6O43541 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.95■□□□□ 0.46
SMAD6O43541 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
SMAD6O43541 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SMAD6O43541 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.95■□□□□ 0.46
SMAD6O43541 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.95■□□□□ 0.46
SMAD6O43541 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMAD6O43541 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.94■□□□□ 0.46
SMAD6O43541 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.94■□□□□ 0.46
SMAD6O43541 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.94■□□□□ 0.46
SMAD6O43541 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.94■□□□□ 0.46
SMAD6O43541 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.94■□□□□ 0.46
SMAD6O43541 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SMAD6O43541 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.94■□□□□ 0.46
SMAD6O43541 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 DDX43P3-201ENST00000441064 443 ntBASIC17.94■□□□□ 0.46
SMAD6O43541 FAM197Y8-203ENST00000450145 560 ntBASIC17.94■□□□□ 0.46
SMAD6O43541 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
SMAD6O43541 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.94■□□□□ 0.46
SMAD6O43541 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.94■□□□□ 0.46
SMAD6O43541 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SMAD6O43541 SLC25A6P4-201ENST00000586535 553 ntBASIC17.94■□□□□ 0.46
SMAD6O43541 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SMAD6O43541 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.94■□□□□ 0.46
SMAD6O43541 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SMAD6O43541 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SMAD6O43541 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.94■□□□□ 0.46
SMAD6O43541 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SMAD6O43541 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMAD6O43541 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.94■□□□□ 0.46
SMAD6O43541 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.93■□□□□ 0.46
SMAD6O43541 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.93■□□□□ 0.46
SMAD6O43541 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMAD6O43541 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMAD6O43541 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.93■□□□□ 0.46
SMAD6O43541 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMAD6O43541 AL049757.1-201ENST00000616842 1596 ntBASIC17.93■□□□□ 0.46
SMAD6O43541 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SMAD6O43541 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.93■□□□□ 0.46
SMAD6O43541 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SMAD6O43541 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.93■□□□□ 0.46
SMAD6O43541 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
SMAD6O43541 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.93■□□□□ 0.46
SMAD6O43541 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.93■□□□□ 0.46
SMAD6O43541 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SMAD6O43541 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.93■□□□□ 0.46
SMAD6O43541 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMAD6O43541 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SMAD6O43541 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.93■□□□□ 0.46
SMAD6O43541 AC148477.8-201ENST00000624298 468 ntBASIC17.93■□□□□ 0.46
SMAD6O43541 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SMAD6O43541 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMAD6O43541 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMAD6O43541 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMAD6O43541 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMAD6O43541 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SMAD6O43541 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMAD6O43541 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMAD6O43541 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMAD6O43541 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMAD6O43541 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.92■□□□□ 0.46
SMAD6O43541 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMAD6O43541 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms