Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SEMA3EO15041 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SEMA3EO15041 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SEMA3EO15041 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.35■■□□□ 1.01
SEMA3EO15041 AC005104.2-201ENST00000427818 678 ntBASIC21.35■■□□□ 1.01
SEMA3EO15041 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.35■■□□□ 1.01
SEMA3EO15041 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SEMA3EO15041 IGHV3-52-201ENST00000519770 353 ntBASIC21.35■■□□□ 1.01
SEMA3EO15041 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.35■■□□□ 1.01
SEMA3EO15041 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.35■■□□□ 1.01
SEMA3EO15041 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.35■■□□□ 1.01
SEMA3EO15041 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.35■■□□□ 1.01
SEMA3EO15041 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.35■■□□□ 1.01
SEMA3EO15041 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.35■■□□□ 1.01
SEMA3EO15041 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SEMA3EO15041 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.35■■□□□ 1.01
SEMA3EO15041 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SEMA3EO15041 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SEMA3EO15041 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SEMA3EO15041 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.34■■□□□ 1.01
SEMA3EO15041 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.34■■□□□ 1.01
SEMA3EO15041 AC138028.4-201ENST00000564984 1845 ntBASIC21.34■■□□□ 1.01
SEMA3EO15041 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 AC004817.3-201ENST00000602957 2129 ntBASIC21.34■■□□□ 1.01
SEMA3EO15041 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SEMA3EO15041 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.34■■□□□ 1.01
SEMA3EO15041 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SEMA3EO15041 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 SIGLEC30P-201ENST00000455569 941 ntBASIC21.34■■□□□ 1.01
SEMA3EO15041 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.34■■□□□ 1.01
SEMA3EO15041 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.34■■□□□ 1.01
SEMA3EO15041 AC023511.2-201ENST00000618803 211 ntBASIC21.34■■□□□ 1.01
SEMA3EO15041 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
SEMA3EO15041 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SEMA3EO15041 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
SEMA3EO15041 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SEMA3EO15041 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEMA3EO15041 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.33■■□□□ 1.01
SEMA3EO15041 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEMA3EO15041 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.33■■□□□ 1.01
SEMA3EO15041 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.33■■□□□ 1.01
SEMA3EO15041 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEMA3EO15041 AP002414.3-201ENST00000589352 1468 ntBASIC21.33■■□□□ 1.01
SEMA3EO15041 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEMA3EO15041 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SEMA3EO15041 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEMA3EO15041 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.33■■□□□ 1.01
SEMA3EO15041 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
SEMA3EO15041 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.33■■□□□ 1.01
SEMA3EO15041 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.33■■□□□ 1.01
SEMA3EO15041 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SEMA3EO15041 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEMA3EO15041 MYCLP1-201ENST00000372451 1075 ntBASIC21.33■■□□□ 1.01
SEMA3EO15041 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SEMA3EO15041 AC073621.1-201ENST00000392730 636 ntBASIC21.33■■□□□ 1.01
SEMA3EO15041 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.33■■□□□ 1.01
SEMA3EO15041 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEMA3EO15041 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.33■■□□□ 1.01
SEMA3EO15041 PGM5P2-202ENST00000637225 1043 ntBASIC21.33■■□□□ 1.01
SEMA3EO15041 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.33■■□□□ 1
SEMA3EO15041 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.33■■□□□ 1
SEMA3EO15041 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.33■■□□□ 1
SEMA3EO15041 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
SEMA3EO15041 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
SEMA3EO15041 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SEMA3EO15041 AC148477.5-201ENST00000625164 1645 ntBASIC21.33■■□□□ 1
SEMA3EO15041 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SEMA3EO15041 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.32■■□□□ 1
SEMA3EO15041 BICD1-207ENST00000551848 1962 ntBASIC21.32■■□□□ 1
SEMA3EO15041 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.32■■□□□ 1
SEMA3EO15041 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.32■■□□□ 1
SEMA3EO15041 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.32■■□□□ 1
SEMA3EO15041 AC104109.2-201ENST00000602919 1418 ntBASIC21.32■■□□□ 1
SEMA3EO15041 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SEMA3EO15041 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SEMA3EO15041 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SEMA3EO15041 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.32■■□□□ 1
SEMA3EO15041 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SEMA3EO15041 RNA5SP415-201ENST00000517246 115 ntBASIC21.32■■□□□ 1
SEMA3EO15041 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.32■■□□□ 1
SEMA3EO15041 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.32■■□□□ 1
SEMA3EO15041 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.32■■□□□ 1
SEMA3EO15041 Z83851.2-201ENST00000609564 659 ntBASIC21.32■■□□□ 1
SEMA3EO15041 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SEMA3EO15041 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.32■■□□□ 1
SEMA3EO15041 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.32■■□□□ 1
SEMA3EO15041 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SEMA3EO15041 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SEMA3EO15041 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SEMA3EO15041 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms