Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM38O00635 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
TRIM38O00635 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM38O00635 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM38O00635 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM38O00635 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM38O00635 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM38O00635 AP005901.3-202ENST00000581653 237 ntBASIC17.93■□□□□ 0.46
TRIM38O00635 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM38O00635 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM38O00635 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM38O00635 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM38O00635 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM38O00635 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRIM38O00635 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRIM38O00635 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM38O00635 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM38O00635 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM38O00635 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM38O00635 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM38O00635 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM38O00635 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
TRIM38O00635 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM38O00635 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM38O00635 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM38O00635 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM38O00635 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 SLC25A6P5-201ENST00000435663 894 ntBASIC17.92■□□□□ 0.46
TRIM38O00635 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM38O00635 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM38O00635 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM38O00635 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM38O00635 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM38O00635 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRIM38O00635 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM38O00635 NSUN5P1-202ENST00000421140 1535 ntBASIC17.92■□□□□ 0.46
TRIM38O00635 NSUN5P2-203ENST00000457352 1529 ntBASIC17.92■□□□□ 0.46
TRIM38O00635 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM38O00635 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TRIM38O00635 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 AL357033.4-201ENST00000617703 1807 ntBASIC17.91■□□□□ 0.46
TRIM38O00635 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 KRT8P50-201ENST00000562022 1438 ntBASIC17.91■□□□□ 0.46
TRIM38O00635 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 AC135776.1-201ENST00000319817 2481 ntBASIC17.91■□□□□ 0.46
TRIM38O00635 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM38O00635 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 AKR1C7P-201ENST00000305623 895 ntBASIC17.91■□□□□ 0.46
TRIM38O00635 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM38O00635 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 AC079776.4-201ENST00000511039 504 ntBASIC17.91■□□□□ 0.46
TRIM38O00635 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM38O00635 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM38O00635 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRIM38O00635 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM38O00635 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRIM38O00635 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM38O00635 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM38O00635 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRIM38O00635 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM38O00635 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM38O00635 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM38O00635 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM38O00635 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.9■□□□□ 0.46
TRIM38O00635 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.9■□□□□ 0.46
TRIM38O00635 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
TRIM38O00635 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM38O00635 SIRPAP1-201ENST00000448467 1770 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms