Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 AC008175.2-201ENST00000612840 297 ntBASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 AC061975.6-201ENST00000579045 1553 ntBASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 TFPT-201ENST00000391757 774 ntTSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 AC137630.3-201ENST00000607245 391 ntBASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 AP001094.4-201ENST00000579008 2176 ntBASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
CHKB-CPT1BH3BT56 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 BANP-227ENST00000626016 2144 ntTSL 2 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
CHKB-CPT1BH3BT56 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms