Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 MIR1233-2-201ENST00000408138 82 ntBASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 MIR1233-1-201ENST00000408722 82 ntBASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 AL591424.1-201ENST00000442569 1213 ntBASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 PRYP5-201ENST00000451909 266 ntBASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 UNC93B6-202ENST00000528242 690 ntBASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 AL356488.2-201ENST00000602755 427 ntBASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 FAM197Y3-203ENST00000618346 717 ntBASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 MIR1199-201ENST00000621445 119 ntBASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 AC073592.4-201ENST00000623827 446 ntBASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.02■□□□□ 0.47
TBC1D3BA6NDS4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3BA6NDS4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.02■□□□□ 0.47
TBC1D3BA6NDS4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3BA6NDS4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3BA6NDS4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3BA6NDS4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.02■□□□□ 0.47
TBC1D3BA6NDS4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3BA6NDS4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3BA6NDS4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 SPDYE21P-201ENST00000413323 827 ntBASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 AC006557.2-201ENST00000592985 1240 ntBASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 AC093677.2-201ENST00000600169 1863 ntBASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
TBC1D3BA6NDS4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 SIGLEC16-201ENST00000599858 1437 ntBASIC18■□□□□ 0.47
TBC1D3BA6NDS4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 AL020989.1-201ENST00000422979 469 ntBASIC18■□□□□ 0.47
TBC1D3BA6NDS4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 KRT18P3-201ENST00000451602 1288 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms