Protein–RNA interactions for Protein: A6NCI4

VWA3A, von Willebrand factor A domain-containing protein 3A, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3AA6NCI4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 AC068472.1-201ENST00000474589 881 ntBASIC20.22■□□□□ 0.83
VWA3AA6NCI4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VWA3AA6NCI4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 MTCL1P1-201ENST00000446207 792 ntBASIC20.21■□□□□ 0.83
VWA3AA6NCI4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 AL136038.3-201ENST00000561909 1096 ntBASIC20.21■□□□□ 0.83
VWA3AA6NCI4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 AC116407.2-201ENST00000613639 860 ntBASIC20.21■□□□□ 0.83
VWA3AA6NCI4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.21■□□□□ 0.83
VWA3AA6NCI4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 TSPY22P-201ENST00000427496 604 ntBASIC20.2■□□□□ 0.82
VWA3AA6NCI4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.2■□□□□ 0.82
VWA3AA6NCI4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
VWA3AA6NCI4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 AC011498.5-201ENST00000592027 486 ntBASIC20.19■□□□□ 0.82
VWA3AA6NCI4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.19■□□□□ 0.82
VWA3AA6NCI4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VWA3AA6NCI4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VWA3AA6NCI4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.18■□□□□ 0.82
VWA3AA6NCI4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
VWA3AA6NCI4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VWA3AA6NCI4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.18■□□□□ 0.82
VWA3AA6NCI4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VWA3AA6NCI4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VWA3AA6NCI4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms