Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSC5DA1L4H1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SSC5DA1L4H1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSC5DA1L4H1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SSC5DA1L4H1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.56■□□□□ 0.88
SSC5DA1L4H1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSC5DA1L4H1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.56■□□□□ 0.88
SSC5DA1L4H1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 PAWRP1-201ENST00000451083 565 ntBASIC20.55■□□□□ 0.88
SSC5DA1L4H1 CXCL1P1-201ENST00000502804 216 ntBASIC20.55■□□□□ 0.88
SSC5DA1L4H1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 CROCCP3-202ENST00000420820 1947 ntBASIC20.55■□□□□ 0.88
SSC5DA1L4H1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.55■□□□□ 0.88
SSC5DA1L4H1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 ACTL9-202ENST00000612068 1252 ntBASIC20.55■□□□□ 0.88
SSC5DA1L4H1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.55■□□□□ 0.88
SSC5DA1L4H1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 DDX43P3-201ENST00000441064 443 ntBASIC20.54■□□□□ 0.88
SSC5DA1L4H1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 AC007064.4-201ENST00000637740 555 ntBASIC20.54■□□□□ 0.88
SSC5DA1L4H1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSC5DA1L4H1 BX276092.7-203ENST00000637198 1536 ntBASIC20.53■□□□□ 0.88
SSC5DA1L4H1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 AL590787.1-201ENST00000568856 1315 ntBASIC20.53■□□□□ 0.88
SSC5DA1L4H1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSC5DA1L4H1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.52■□□□□ 0.88
SSC5DA1L4H1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms