Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRAV26-1A0A087WT03 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
TRAV26-1A0A087WT03 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRAV26-1A0A087WT03 WIZP1-201ENST00000531444 2299 ntBASIC12.95□□□□□ -0.34
TRAV26-1A0A087WT03 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV26-1A0A087WT03 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TRAV26-1A0A087WT03 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TRAV26-1A0A087WT03 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 AL163051.1-201ENST00000569214 1512 ntBASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 STARP1-201ENST00000397973 869 ntBASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 MIR3180-4-201ENST00000582223 153 ntBASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 AC010331.1-201ENST00000611423 582 ntBASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 AL157888.1-201ENST00000631930 593 ntBASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 USP49-202ENST00000373010 2446 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV26-1A0A087WT03 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 FAM8A6P-201ENST00000407496 1135 ntBASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 SPDYE15P-201ENST00000424157 909 ntBASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 AC087388.1-201ENST00000571370 1112 ntBASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 NTF6B-201ENST00000591913 560 ntBASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV26-1A0A087WT03 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms