Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHGA3Q9Y5H0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHGA3Q9Y5H0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHGA3Q9Y5H0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PCDHGA3Q9Y5H0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA3Q9Y5H0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHGA3Q9Y5H0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHGA3Q9Y5H0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHGA3Q9Y5H0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA3Q9Y5H0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA3Q9Y5H0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PCDHGA3Q9Y5H0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA3Q9Y5H0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA3Q9Y5H0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PCDHGA3Q9Y5H0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA3Q9Y5H0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA3Q9Y5H0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA3Q9Y5H0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.71■■□□□ 1.39
PCDHGA3Q9Y5H0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA3Q9Y5H0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHGA3Q9Y5H0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA3Q9Y5H0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA3Q9Y5H0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA3Q9Y5H0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHGA3Q9Y5H0 RP9P-202ENST00000450133 1212 ntBASIC23.69■■□□□ 1.38
PCDHGA3Q9Y5H0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGA3Q9Y5H0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
PCDHGA3Q9Y5H0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGA3Q9Y5H0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA3Q9Y5H0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA3Q9Y5H0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHGA3Q9Y5H0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA3Q9Y5H0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA3Q9Y5H0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA3Q9Y5H0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.68■■□□□ 1.38
PCDHGA3Q9Y5H0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA3Q9Y5H0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHGA3Q9Y5H0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.67■■□□□ 1.38
PCDHGA3Q9Y5H0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA3Q9Y5H0 DUX4L18-201ENST00000553347 1267 ntBASIC23.67■■□□□ 1.38
PCDHGA3Q9Y5H0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.67■■□□□ 1.38
PCDHGA3Q9Y5H0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA3Q9Y5H0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHGA3Q9Y5H0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDHGA3Q9Y5H0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDHGA3Q9Y5H0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDHGA3Q9Y5H0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA3Q9Y5H0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
PCDHGA3Q9Y5H0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA3Q9Y5H0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA3Q9Y5H0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGA3Q9Y5H0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA3Q9Y5H0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHGA3Q9Y5H0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.64■■□□□ 1.38
PCDHGA3Q9Y5H0 AP002414.2-202ENST00000590929 1450 ntBASIC23.64■■□□□ 1.38
PCDHGA3Q9Y5H0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.64■■□□□ 1.37
PCDHGA3Q9Y5H0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PCDHGA3Q9Y5H0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA3Q9Y5H0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA3Q9Y5H0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA3Q9Y5H0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA3Q9Y5H0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHGA3Q9Y5H0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PCDHGA3Q9Y5H0 RAP2CP1-202ENST00000605179 643 ntBASIC23.63■■□□□ 1.37
PCDHGA3Q9Y5H0 AL139393.2-201ENST00000608721 2025 ntBASIC23.63■■□□□ 1.37
PCDHGA3Q9Y5H0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA3Q9Y5H0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA3Q9Y5H0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA3Q9Y5H0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PCDHGA3Q9Y5H0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA3Q9Y5H0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PCDHGA3Q9Y5H0 AC093536.1-201ENST00000569153 554 ntBASIC23.62■■□□□ 1.37
PCDHGA3Q9Y5H0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHGA3Q9Y5H0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHGA3Q9Y5H0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PCDHGA3Q9Y5H0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA3Q9Y5H0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA3Q9Y5H0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA3Q9Y5H0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA3Q9Y5H0 MIR3960-201ENST00000583311 91 ntBASIC23.61■■□□□ 1.37
PCDHGA3Q9Y5H0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHGA3Q9Y5H0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA3Q9Y5H0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PCDHGA3Q9Y5H0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA3Q9Y5H0 DRD5P2-201ENST00000421395 2012 ntBASIC23.59■■□□□ 1.37
PCDHGA3Q9Y5H0 DUX4L9-201ENST00000449051 1259 ntBASIC23.59■■□□□ 1.37
PCDHGA3Q9Y5H0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGA3Q9Y5H0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGA3Q9Y5H0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA3Q9Y5H0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHGA3Q9Y5H0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHGA3Q9Y5H0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
PCDHGA3Q9Y5H0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGA3Q9Y5H0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHGA3Q9Y5H0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
PCDHGA3Q9Y5H0 AC074183.2-201ENST00000623112 922 ntBASIC23.57■■□□□ 1.36
PCDHGA3Q9Y5H0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHGA3Q9Y5H0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHGA3Q9Y5H0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA3Q9Y5H0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms