Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RCL1Q9Y2P8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RCL1Q9Y2P8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RCL1Q9Y2P8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RCL1Q9Y2P8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RCL1Q9Y2P8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RCL1Q9Y2P8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RCL1Q9Y2P8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RCL1Q9Y2P8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RCL1Q9Y2P8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RCL1Q9Y2P8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCL1Q9Y2P8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCL1Q9Y2P8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RCL1Q9Y2P8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCL1Q9Y2P8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.9■□□□□ 0.78
RCL1Q9Y2P8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCL1Q9Y2P8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RCL1Q9Y2P8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCL1Q9Y2P8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RCL1Q9Y2P8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCL1Q9Y2P8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCL1Q9Y2P8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RCL1Q9Y2P8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.89■□□□□ 0.77
RCL1Q9Y2P8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RCL1Q9Y2P8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RCL1Q9Y2P8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RCL1Q9Y2P8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.89■□□□□ 0.77
RCL1Q9Y2P8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.89■□□□□ 0.77
RCL1Q9Y2P8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 LINC00273-201ENST00000539813 1452 ntBASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 AC010501.1-201ENST00000606270 1962 ntBASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.88■□□□□ 0.77
RCL1Q9Y2P8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCL1Q9Y2P8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCL1Q9Y2P8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCL1Q9Y2P8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCL1Q9Y2P8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RCL1Q9Y2P8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCL1Q9Y2P8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.86■□□□□ 0.77
RCL1Q9Y2P8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.86■□□□□ 0.77
RCL1Q9Y2P8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.86■□□□□ 0.77
RCL1Q9Y2P8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.86■□□□□ 0.77
RCL1Q9Y2P8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RCL1Q9Y2P8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RCL1Q9Y2P8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RCL1Q9Y2P8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RCL1Q9Y2P8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RCL1Q9Y2P8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.85■□□□□ 0.77
RCL1Q9Y2P8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RCL1Q9Y2P8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RCL1Q9Y2P8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RCL1Q9Y2P8 AL139125.2-201ENST00000623134 1869 ntBASIC19.84■□□□□ 0.77
RCL1Q9Y2P8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RCL1Q9Y2P8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RCL1Q9Y2P8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RCL1Q9Y2P8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RCL1Q9Y2P8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.84■□□□□ 0.77
RCL1Q9Y2P8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RCL1Q9Y2P8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RCL1Q9Y2P8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RCL1Q9Y2P8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RCL1Q9Y2P8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RCL1Q9Y2P8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.83■□□□□ 0.76
RCL1Q9Y2P8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RCL1Q9Y2P8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RCL1Q9Y2P8 AC138932.3-201ENST00000567634 1902 ntBASIC19.82■□□□□ 0.76
RCL1Q9Y2P8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCL1Q9Y2P8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCL1Q9Y2P8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCL1Q9Y2P8 MIR762-201ENST00000390236 83 ntBASIC19.82■□□□□ 0.76
RCL1Q9Y2P8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RCL1Q9Y2P8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCL1Q9Y2P8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCL1Q9Y2P8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.82■□□□□ 0.76
RCL1Q9Y2P8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCL1Q9Y2P8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCL1Q9Y2P8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCL1Q9Y2P8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCL1Q9Y2P8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms