Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
UBQLN3Q9H347 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
UBQLN3Q9H347 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBQLN3Q9H347 RARRES2P2-201ENST00000394842 485 ntBASIC22.74■■□□□ 1.23
UBQLN3Q9H347 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
UBQLN3Q9H347 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBQLN3Q9H347 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
UBQLN3Q9H347 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
UBQLN3Q9H347 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.72■■□□□ 1.23
UBQLN3Q9H347 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.72■■□□□ 1.23
UBQLN3Q9H347 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN3Q9H347 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN3Q9H347 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN3Q9H347 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN3Q9H347 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN3Q9H347 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
UBQLN3Q9H347 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
UBQLN3Q9H347 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
UBQLN3Q9H347 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBQLN3Q9H347 AC126177.7-201ENST00000547904 679 ntBASIC22.71■■□□□ 1.23
UBQLN3Q9H347 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.7■■□□□ 1.22
UBQLN3Q9H347 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.7■■□□□ 1.22
UBQLN3Q9H347 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
UBQLN3Q9H347 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
UBQLN3Q9H347 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBQLN3Q9H347 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
UBQLN3Q9H347 AC092296.2-201ENST00000589470 999 ntBASIC22.69■■□□□ 1.22
UBQLN3Q9H347 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.69■■□□□ 1.22
UBQLN3Q9H347 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.69■■□□□ 1.22
UBQLN3Q9H347 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.69■■□□□ 1.22
UBQLN3Q9H347 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
UBQLN3Q9H347 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
UBQLN3Q9H347 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN3Q9H347 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN3Q9H347 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN3Q9H347 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
UBQLN3Q9H347 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN3Q9H347 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.67■■□□□ 1.22
UBQLN3Q9H347 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN3Q9H347 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN3Q9H347 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.67■■□□□ 1.22
UBQLN3Q9H347 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN3Q9H347 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
UBQLN3Q9H347 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.66■■□□□ 1.22
UBQLN3Q9H347 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBQLN3Q9H347 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
UBQLN3Q9H347 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.66■■□□□ 1.22
UBQLN3Q9H347 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UBQLN3Q9H347 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
UBQLN3Q9H347 AL449106.1-201ENST00000608517 1980 ntBASIC22.65■■□□□ 1.22
UBQLN3Q9H347 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBQLN3Q9H347 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UBQLN3Q9H347 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
UBQLN3Q9H347 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
UBQLN3Q9H347 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UBQLN3Q9H347 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UBQLN3Q9H347 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBQLN3Q9H347 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
UBQLN3Q9H347 AL157400.5-201ENST00000507624 621 ntBASIC22.63■■□□□ 1.21
UBQLN3Q9H347 AL359258.2-201ENST00000564063 1566 ntBASIC22.63■■□□□ 1.21
UBQLN3Q9H347 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
UBQLN3Q9H347 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBQLN3Q9H347 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBQLN3Q9H347 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBQLN3Q9H347 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
UBQLN3Q9H347 AC091060.1-201ENST00000623524 1766 ntBASIC22.61■■□□□ 1.21
UBQLN3Q9H347 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBQLN3Q9H347 ECEL1P2-201ENST00000461596 1295 ntBASIC22.6■■□□□ 1.21
UBQLN3Q9H347 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.6■■□□□ 1.21
UBQLN3Q9H347 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.59■■□□□ 1.21
UBQLN3Q9H347 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBQLN3Q9H347 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.59■■□□□ 1.21
UBQLN3Q9H347 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.58■■□□□ 1.21
UBQLN3Q9H347 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBQLN3Q9H347 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.58■■□□□ 1.21
UBQLN3Q9H347 ABHD17AP5-201ENST00000580133 923 ntBASIC22.58■■□□□ 1.21
UBQLN3Q9H347 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.58■■□□□ 1.21
UBQLN3Q9H347 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.2
UBQLN3Q9H347 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
UBQLN3Q9H347 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBQLN3Q9H347 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.57■■□□□ 1.2
UBQLN3Q9H347 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.57■■□□□ 1.2
UBQLN3Q9H347 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBQLN3Q9H347 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBQLN3Q9H347 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBQLN3Q9H347 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
UBQLN3Q9H347 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UBQLN3Q9H347 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBQLN3Q9H347 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.56■■□□□ 1.2
UBQLN3Q9H347 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.55■■□□□ 1.2
UBQLN3Q9H347 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN3Q9H347 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBQLN3Q9H347 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
UBQLN3Q9H347 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN3Q9H347 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.54■■□□□ 1.2
UBQLN3Q9H347 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN3Q9H347 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN3Q9H347 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.54■■□□□ 1.2
UBQLN3Q9H347 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBQLN3Q9H347 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms