Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX47Q9H0S4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.51■■□□□ 1.67
DDX47Q9H0S4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.51■■□□□ 1.67
DDX47Q9H0S4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX47Q9H0S4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX47Q9H0S4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX47Q9H0S4 AC087741.3-201ENST00000624270 1347 ntBASIC25.5■■□□□ 1.67
DDX47Q9H0S4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX47Q9H0S4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX47Q9H0S4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX47Q9H0S4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
DDX47Q9H0S4 AP006261.1-201ENST00000584783 668 ntBASIC25.48■■□□□ 1.67
DDX47Q9H0S4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX47Q9H0S4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX47Q9H0S4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX47Q9H0S4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX47Q9H0S4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX47Q9H0S4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.46■■□□□ 1.67
DDX47Q9H0S4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX47Q9H0S4 AC010501.1-201ENST00000606270 1962 ntBASIC25.45■■□□□ 1.67
DDX47Q9H0S4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
DDX47Q9H0S4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
DDX47Q9H0S4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
DDX47Q9H0S4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DDX47Q9H0S4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.44■■□□□ 1.66
DDX47Q9H0S4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DDX47Q9H0S4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX47Q9H0S4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX47Q9H0S4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DDX47Q9H0S4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
DDX47Q9H0S4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
DDX47Q9H0S4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.43■■□□□ 1.66
DDX47Q9H0S4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.43■■□□□ 1.66
DDX47Q9H0S4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX47Q9H0S4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX47Q9H0S4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX47Q9H0S4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
DDX47Q9H0S4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
DDX47Q9H0S4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX47Q9H0S4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.41■■□□□ 1.66
DDX47Q9H0S4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX47Q9H0S4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX47Q9H0S4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
DDX47Q9H0S4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX47Q9H0S4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
DDX47Q9H0S4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
DDX47Q9H0S4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.39■■□□□ 1.66
DDX47Q9H0S4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX47Q9H0S4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX47Q9H0S4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX47Q9H0S4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX47Q9H0S4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX47Q9H0S4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
DDX47Q9H0S4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
DDX47Q9H0S4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX47Q9H0S4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
DDX47Q9H0S4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.36■■□□□ 1.65
DDX47Q9H0S4 AL162393.1-201ENST00000437852 946 ntBASIC25.36■■□□□ 1.65
DDX47Q9H0S4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.36■■□□□ 1.65
DDX47Q9H0S4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.36■■□□□ 1.65
DDX47Q9H0S4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.36■■□□□ 1.65
DDX47Q9H0S4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.36■■□□□ 1.65
DDX47Q9H0S4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.35■■□□□ 1.65
DDX47Q9H0S4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.35■■□□□ 1.65
DDX47Q9H0S4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.35■■□□□ 1.65
DDX47Q9H0S4 AC044849.2-201ENST00000606596 710 ntBASIC25.35■■□□□ 1.65
DDX47Q9H0S4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX47Q9H0S4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX47Q9H0S4 AC021231.2-201ENST00000594613 730 ntBASIC25.34■■□□□ 1.65
DDX47Q9H0S4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
DDX47Q9H0S4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
DDX47Q9H0S4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.34■■□□□ 1.65
DDX47Q9H0S4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX47Q9H0S4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.33■■□□□ 1.65
DDX47Q9H0S4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
DDX47Q9H0S4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
DDX47Q9H0S4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX47Q9H0S4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.32■■□□□ 1.64
DDX47Q9H0S4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX47Q9H0S4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX47Q9H0S4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
DDX47Q9H0S4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.32■■□□□ 1.64
DDX47Q9H0S4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX47Q9H0S4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
DDX47Q9H0S4 AC142381.3-201ENST00000568208 1670 ntBASIC25.32■■□□□ 1.64
DDX47Q9H0S4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX47Q9H0S4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX47Q9H0S4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX47Q9H0S4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.31■■□□□ 1.64
DDX47Q9H0S4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX47Q9H0S4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX47Q9H0S4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
DDX47Q9H0S4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.3■■□□□ 1.64
DDX47Q9H0S4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
DDX47Q9H0S4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
DDX47Q9H0S4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX47Q9H0S4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX47Q9H0S4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.29■■□□□ 1.64
DDX47Q9H0S4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
DDX47Q9H0S4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms