Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RNF183Q96D59 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF183Q96D59 AC025884.2-201ENST00000553429 711 ntBASIC18■□□□□ 0.47
RNF183Q96D59 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18■□□□□ 0.47
RNF183Q96D59 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF183Q96D59 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF183Q96D59 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF183Q96D59 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.99■□□□□ 0.47
RNF183Q96D59 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF183Q96D59 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF183Q96D59 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF183Q96D59 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RNF183Q96D59 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RNF183Q96D59 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF183Q96D59 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF183Q96D59 DRD5P2-201ENST00000421395 2012 ntBASIC17.98■□□□□ 0.47
RNF183Q96D59 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF183Q96D59 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF183Q96D59 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF183Q96D59 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF183Q96D59 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF183Q96D59 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF183Q96D59 WHAMMP3-201ENST00000611636 1609 ntBASIC17.98■□□□□ 0.47
RNF183Q96D59 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF183Q96D59 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF183Q96D59 KRT18P60-201ENST00000312876 1297 ntBASIC17.97■□□□□ 0.47
RNF183Q96D59 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF183Q96D59 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF183Q96D59 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF183Q96D59 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF183Q96D59 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.96■□□□□ 0.47
RNF183Q96D59 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF183Q96D59 AC133552.2-201ENST00000619106 1032 ntBASIC17.96■□□□□ 0.47
RNF183Q96D59 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.96■□□□□ 0.46
RNF183Q96D59 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF183Q96D59 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF183Q96D59 RP9P-202ENST00000450133 1212 ntBASIC17.95■□□□□ 0.46
RNF183Q96D59 MIR3960-201ENST00000583311 91 ntBASIC17.95■□□□□ 0.46
RNF183Q96D59 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RNF183Q96D59 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF183Q96D59 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF183Q96D59 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF183Q96D59 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF183Q96D59 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF183Q96D59 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RNF183Q96D59 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF183Q96D59 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF183Q96D59 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.94■□□□□ 0.46
RNF183Q96D59 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF183Q96D59 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RNF183Q96D59 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF183Q96D59 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF183Q96D59 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RNF183Q96D59 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF183Q96D59 AC009831.1-201ENST00000580420 1582 ntBASIC17.93■□□□□ 0.46
RNF183Q96D59 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF183Q96D59 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF183Q96D59 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF183Q96D59 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF183Q96D59 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF183Q96D59 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF183Q96D59 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF183Q96D59 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF183Q96D59 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF183Q96D59 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF183Q96D59 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF183Q96D59 AL033527.3-201ENST00000566366 1196 ntBASIC17.92■□□□□ 0.46
RNF183Q96D59 AC026202.3-201ENST00000600805 1127 ntBASIC17.92■□□□□ 0.46
RNF183Q96D59 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RNF183Q96D59 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF183Q96D59 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF183Q96D59 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF183Q96D59 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF183Q96D59 TSPY13P-201ENST00000338964 914 ntBASIC17.91■□□□□ 0.46
RNF183Q96D59 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF183Q96D59 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF183Q96D59 AC093536.1-201ENST00000569153 554 ntBASIC17.91■□□□□ 0.46
RNF183Q96D59 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF183Q96D59 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF183Q96D59 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF183Q96D59 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF183Q96D59 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF183Q96D59 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF183Q96D59 AL592293.1-201ENST00000502889 1188 ntBASIC17.9■□□□□ 0.46
RNF183Q96D59 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF183Q96D59 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF183Q96D59 AL359504.2-201ENST00000605506 1601 ntBASIC17.9■□□□□ 0.46
RNF183Q96D59 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF183Q96D59 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RNF183Q96D59 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF183Q96D59 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF183Q96D59 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF183Q96D59 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
RNF183Q96D59 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF183Q96D59 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF183Q96D59 AC004987.1-201ENST00000428627 508 ntBASIC17.89■□□□□ 0.45
RNF183Q96D59 ATP5G2P3-201ENST00000429083 425 ntBASIC17.89■□□□□ 0.45
RNF183Q96D59 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF183Q96D59 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF183Q96D59 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms