Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
U2AF1L4Q8WU68 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
U2AF1L4Q8WU68 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
U2AF1L4Q8WU68 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
U2AF1L4Q8WU68 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.24■■■□□ 2.11
U2AF1L4Q8WU68 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.24■■■□□ 2.11
U2AF1L4Q8WU68 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC28.24■■■□□ 2.11
U2AF1L4Q8WU68 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.24■■■□□ 2.11
U2AF1L4Q8WU68 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
U2AF1L4Q8WU68 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
U2AF1L4Q8WU68 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
U2AF1L4Q8WU68 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.23■■■□□ 2.11
U2AF1L4Q8WU68 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
U2AF1L4Q8WU68 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
U2AF1L4Q8WU68 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.23■■■□□ 2.11
U2AF1L4Q8WU68 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
U2AF1L4Q8WU68 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
U2AF1L4Q8WU68 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
U2AF1L4Q8WU68 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
U2AF1L4Q8WU68 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
U2AF1L4Q8WU68 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.22■■■□□ 2.11
U2AF1L4Q8WU68 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.22■■■□□ 2.11
U2AF1L4Q8WU68 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
U2AF1L4Q8WU68 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.21■■■□□ 2.11
U2AF1L4Q8WU68 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.21■■■□□ 2.11
U2AF1L4Q8WU68 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.21■■■□□ 2.11
U2AF1L4Q8WU68 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
U2AF1L4Q8WU68 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.2■■■□□ 2.11
U2AF1L4Q8WU68 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
U2AF1L4Q8WU68 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
U2AF1L4Q8WU68 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
U2AF1L4Q8WU68 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.2■■■□□ 2.1
U2AF1L4Q8WU68 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.2■■■□□ 2.1
U2AF1L4Q8WU68 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
U2AF1L4Q8WU68 AL031848.2-201ENST00000607670 837 ntBASIC28.19■■■□□ 2.1
U2AF1L4Q8WU68 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.19■■■□□ 2.1
U2AF1L4Q8WU68 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
U2AF1L4Q8WU68 AC103724.3-201ENST00000564481 992 ntBASIC28.18■■■□□ 2.1
U2AF1L4Q8WU68 AC018755.3-202ENST00000596210 929 ntBASIC28.18■■■□□ 2.1
U2AF1L4Q8WU68 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.18■■■□□ 2.1
U2AF1L4Q8WU68 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.17■■■□□ 2.1
U2AF1L4Q8WU68 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
U2AF1L4Q8WU68 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.17■■■□□ 2.1
U2AF1L4Q8WU68 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.17■■■□□ 2.1
U2AF1L4Q8WU68 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.16■■■□□ 2.1
U2AF1L4Q8WU68 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.16■■■□□ 2.1
U2AF1L4Q8WU68 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
U2AF1L4Q8WU68 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.16■■■□□ 2.1
U2AF1L4Q8WU68 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
U2AF1L4Q8WU68 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.16■■■□□ 2.1
U2AF1L4Q8WU68 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.16■■■□□ 2.1
U2AF1L4Q8WU68 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
U2AF1L4Q8WU68 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.15■■■□□ 2.1
U2AF1L4Q8WU68 AC008406.3-201ENST00000620001 1374 ntBASIC28.14■■■□□ 2.1
U2AF1L4Q8WU68 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.14■■■□□ 2.1
U2AF1L4Q8WU68 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
U2AF1L4Q8WU68 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
U2AF1L4Q8WU68 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
U2AF1L4Q8WU68 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.14■■■□□ 2.1
U2AF1L4Q8WU68 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
U2AF1L4Q8WU68 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
U2AF1L4Q8WU68 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
U2AF1L4Q8WU68 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
U2AF1L4Q8WU68 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.13■■■□□ 2.09
U2AF1L4Q8WU68 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
U2AF1L4Q8WU68 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
U2AF1L4Q8WU68 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.12■■■□□ 2.09
U2AF1L4Q8WU68 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.11■■■□□ 2.09
U2AF1L4Q8WU68 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
U2AF1L4Q8WU68 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
U2AF1L4Q8WU68 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.1■■■□□ 2.09
U2AF1L4Q8WU68 MIR3960-201ENST00000583311 91 ntBASIC28.1■■■□□ 2.09
U2AF1L4Q8WU68 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
U2AF1L4Q8WU68 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
U2AF1L4Q8WU68 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
U2AF1L4Q8WU68 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.09■■■□□ 2.09
U2AF1L4Q8WU68 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
U2AF1L4Q8WU68 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
U2AF1L4Q8WU68 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
U2AF1L4Q8WU68 AC239859.2-201ENST00000444165 318 ntBASIC28.08■■■□□ 2.09
U2AF1L4Q8WU68 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
U2AF1L4Q8WU68 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
U2AF1L4Q8WU68 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
U2AF1L4Q8WU68 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
U2AF1L4Q8WU68 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.07■■■□□ 2.08
U2AF1L4Q8WU68 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
U2AF1L4Q8WU68 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
U2AF1L4Q8WU68 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
U2AF1L4Q8WU68 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.06■■■□□ 2.08
U2AF1L4Q8WU68 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.06■■■□□ 2.08
U2AF1L4Q8WU68 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
U2AF1L4Q8WU68 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
U2AF1L4Q8WU68 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
U2AF1L4Q8WU68 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.06■■■□□ 2.08
U2AF1L4Q8WU68 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
U2AF1L4Q8WU68 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
U2AF1L4Q8WU68 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
U2AF1L4Q8WU68 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
U2AF1L4Q8WU68 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.04■■■□□ 2.08
U2AF1L4Q8WU68 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms