Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC170Q8IYT3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.31■■□□□ 1.8
CCDC170Q8IYT3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC170Q8IYT3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.3■■□□□ 1.8
CCDC170Q8IYT3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC170Q8IYT3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC170Q8IYT3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC170Q8IYT3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC170Q8IYT3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC170Q8IYT3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CCDC170Q8IYT3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.29■■□□□ 1.8
CCDC170Q8IYT3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CCDC170Q8IYT3 ERN1-208ENST00000606895 2068 ntBASIC26.29■■□□□ 1.8
CCDC170Q8IYT3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC170Q8IYT3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC170Q8IYT3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC170Q8IYT3 AL162393.1-201ENST00000437852 946 ntBASIC26.28■■□□□ 1.8
CCDC170Q8IYT3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC170Q8IYT3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC170Q8IYT3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC170Q8IYT3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC170Q8IYT3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC170Q8IYT3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CCDC170Q8IYT3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.27■■□□□ 1.8
CCDC170Q8IYT3 AC021231.2-201ENST00000594613 730 ntBASIC26.27■■□□□ 1.8
CCDC170Q8IYT3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC170Q8IYT3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC170Q8IYT3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC170Q8IYT3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC170Q8IYT3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC170Q8IYT3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC170Q8IYT3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.26■■□□□ 1.79
CCDC170Q8IYT3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC170Q8IYT3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC170Q8IYT3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC170Q8IYT3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC170Q8IYT3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC170Q8IYT3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC170Q8IYT3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC170Q8IYT3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC170Q8IYT3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC170Q8IYT3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.23■■□□□ 1.79
CCDC170Q8IYT3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.23■■□□□ 1.79
CCDC170Q8IYT3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CCDC170Q8IYT3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC170Q8IYT3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CCDC170Q8IYT3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CCDC170Q8IYT3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CCDC170Q8IYT3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC170Q8IYT3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC170Q8IYT3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
CCDC170Q8IYT3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC170Q8IYT3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC170Q8IYT3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
CCDC170Q8IYT3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CCDC170Q8IYT3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC170Q8IYT3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.21■■□□□ 1.79
CCDC170Q8IYT3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC170Q8IYT3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC170Q8IYT3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC170Q8IYT3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
CCDC170Q8IYT3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC170Q8IYT3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC170Q8IYT3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC170Q8IYT3 DUX4L29-201ENST00000425409 679 ntBASIC26.2■■□□□ 1.78
CCDC170Q8IYT3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC170Q8IYT3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC170Q8IYT3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC170Q8IYT3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC170Q8IYT3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.19■■□□□ 1.78
CCDC170Q8IYT3 AC142381.3-201ENST00000568208 1670 ntBASIC26.19■■□□□ 1.78
CCDC170Q8IYT3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC170Q8IYT3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.17■■□□□ 1.78
CCDC170Q8IYT3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.16■■□□□ 1.78
CCDC170Q8IYT3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC170Q8IYT3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC170Q8IYT3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.16■■□□□ 1.78
CCDC170Q8IYT3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC170Q8IYT3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC170Q8IYT3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC170Q8IYT3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC170Q8IYT3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.14■■□□□ 1.78
CCDC170Q8IYT3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC170Q8IYT3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC170Q8IYT3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC170Q8IYT3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC170Q8IYT3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC170Q8IYT3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC170Q8IYT3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
CCDC170Q8IYT3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC170Q8IYT3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC170Q8IYT3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC170Q8IYT3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CCDC170Q8IYT3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.12■■□□□ 1.77
CCDC170Q8IYT3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CCDC170Q8IYT3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC170Q8IYT3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.12■■□□□ 1.77
CCDC170Q8IYT3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.11■■□□□ 1.77
CCDC170Q8IYT3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
CCDC170Q8IYT3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms