Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 AP002414.2-202ENST00000590929 1450 ntBASIC25.8■■□□□ 1.72
DENND4AQ7Z401 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
DENND4AQ7Z401 THA1P-201ENST00000590384 1145 ntBASIC25.8■■□□□ 1.72
DENND4AQ7Z401 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
DENND4AQ7Z401 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.79■■□□□ 1.72
DENND4AQ7Z401 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.79■■□□□ 1.72
DENND4AQ7Z401 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
DENND4AQ7Z401 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DENND4AQ7Z401 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.79■■□□□ 1.72
DENND4AQ7Z401 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DENND4AQ7Z401 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
DENND4AQ7Z401 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.78■■□□□ 1.72
DENND4AQ7Z401 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.78■■□□□ 1.72
DENND4AQ7Z401 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.78■■□□□ 1.72
DENND4AQ7Z401 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DENND4AQ7Z401 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.77■■□□□ 1.72
DENND4AQ7Z401 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.77■■□□□ 1.72
DENND4AQ7Z401 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.77■■□□□ 1.72
DENND4AQ7Z401 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.77■■□□□ 1.72
DENND4AQ7Z401 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
DENND4AQ7Z401 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
DENND4AQ7Z401 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DENND4AQ7Z401 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
DENND4AQ7Z401 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
DENND4AQ7Z401 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
DENND4AQ7Z401 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.74■■□□□ 1.71
DENND4AQ7Z401 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
DENND4AQ7Z401 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DENND4AQ7Z401 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.74■■□□□ 1.71
DENND4AQ7Z401 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.74■■□□□ 1.71
DENND4AQ7Z401 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.74■■□□□ 1.71
DENND4AQ7Z401 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DENND4AQ7Z401 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DENND4AQ7Z401 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
DENND4AQ7Z401 AL359504.2-201ENST00000605506 1601 ntBASIC25.73■■□□□ 1.71
DENND4AQ7Z401 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.73■■□□□ 1.71
DENND4AQ7Z401 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.72■■□□□ 1.71
DENND4AQ7Z401 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.72■■□□□ 1.71
DENND4AQ7Z401 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
DENND4AQ7Z401 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.72■■□□□ 1.71
DENND4AQ7Z401 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.72■■□□□ 1.71
DENND4AQ7Z401 ABCB10P3-201ENST00000561950 2166 ntBASIC25.71■■□□□ 1.71
DENND4AQ7Z401 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
DENND4AQ7Z401 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DENND4AQ7Z401 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
DENND4AQ7Z401 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DENND4AQ7Z401 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DENND4AQ7Z401 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DENND4AQ7Z401 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
DENND4AQ7Z401 AL031848.2-201ENST00000607670 837 ntBASIC25.7■■□□□ 1.7
DENND4AQ7Z401 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.7■■□□□ 1.7
DENND4AQ7Z401 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.69■■□□□ 1.7
DENND4AQ7Z401 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DENND4AQ7Z401 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DENND4AQ7Z401 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
DENND4AQ7Z401 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DENND4AQ7Z401 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DENND4AQ7Z401 AL356441.2-201ENST00000443009 864 ntBASIC25.68■■□□□ 1.7
DENND4AQ7Z401 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
DENND4AQ7Z401 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
DENND4AQ7Z401 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.67■■□□□ 1.7
DENND4AQ7Z401 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DENND4AQ7Z401 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
DENND4AQ7Z401 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
DENND4AQ7Z401 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.66■■□□□ 1.7
DENND4AQ7Z401 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
DENND4AQ7Z401 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.66■■□□□ 1.7
DENND4AQ7Z401 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DENND4AQ7Z401 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
DENND4AQ7Z401 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
DENND4AQ7Z401 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.64■■□□□ 1.7
DENND4AQ7Z401 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
DENND4AQ7Z401 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
DENND4AQ7Z401 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.64■■□□□ 1.69
DENND4AQ7Z401 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
DENND4AQ7Z401 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.64■■□□□ 1.69
DENND4AQ7Z401 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.64■■□□□ 1.69
DENND4AQ7Z401 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
DENND4AQ7Z401 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DENND4AQ7Z401 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
DENND4AQ7Z401 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.63■■□□□ 1.69
DENND4AQ7Z401 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.63■■□□□ 1.69
DENND4AQ7Z401 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.63■■□□□ 1.69
DENND4AQ7Z401 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
DENND4AQ7Z401 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DENND4AQ7Z401 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DENND4AQ7Z401 WHAMMP3-201ENST00000611636 1609 ntBASIC25.63■■□□□ 1.69
DENND4AQ7Z401 Z92544.1-202ENST00000571933 1220 ntBASIC25.62■■□□□ 1.69
DENND4AQ7Z401 AC018755.3-202ENST00000596210 929 ntBASIC25.62■■□□□ 1.69
DENND4AQ7Z401 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
DENND4AQ7Z401 AC019171.1-201ENST00000601251 1056 ntBASIC25.62■■□□□ 1.69
DENND4AQ7Z401 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
DENND4AQ7Z401 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.61■■□□□ 1.69
DENND4AQ7Z401 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
DENND4AQ7Z401 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.6■■□□□ 1.69
DENND4AQ7Z401 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
DENND4AQ7Z401 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.6■■□□□ 1.69
DENND4AQ7Z401 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DENND4AQ7Z401 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DENND4AQ7Z401 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms