Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 YKL018C-AYKL018C-A 300 nt6.69□□□□□ -1.34
RPN9Q04062 SEC62YPL094C 825 nt6.69□□□□□ -1.34
RPN9Q04062 CYB2YML054C 1776 nt6.68□□□□□ -1.34
RPN9Q04062 YKL077WYKL077W 1179 nt6.68□□□□□ -1.34
RPN9Q04062 RDN5-2RDN5-2 119 nt6.68□□□□□ -1.34
RPN9Q04062 RDN5-3RDN5-3 119 nt6.68□□□□□ -1.34
RPN9Q04062 RDN5-4RDN5-4 119 nt6.68□□□□□ -1.34
RPN9Q04062 RDN5-5RDN5-5 119 nt6.68□□□□□ -1.34
RPN9Q04062 YOR111WYOR111W 699 nt6.68□□□□□ -1.34
RPN9Q04062 MIP1YOR330C 3765 nt6.68□□□□□ -1.34
RPN9Q04062 CLN1YMR199W 1641 nt6.68□□□□□ -1.34
RPN9Q04062 CIT3YPR001W 1461 nt6.67□□□□□ -1.34
RPN9Q04062 YBR284WYBR284W 2394 nt6.67□□□□□ -1.34
RPN9Q04062 RQC1YDR333C 2172 nt6.67□□□□□ -1.34
RPN9Q04062 GPD1YDL022W 1176 nt6.67□□□□□ -1.34
RPN9Q04062 YHR020WYHR020W 2067 nt6.66□□□□□ -1.34
RPN9Q04062 RGD2YFL047W 2145 nt6.66□□□□□ -1.34
RPN9Q04062 RPL2BYIL018W 765 nt6.66□□□□□ -1.34
RPN9Q04062 GSH1YJL101C 2037 nt6.66□□□□□ -1.34
RPN9Q04062 DOT1YDR440W 1749 nt6.65□□□□□ -1.34
RPN9Q04062 SEC23YPR181C 2307 nt6.65□□□□□ -1.34
RPN9Q04062 YFL013W-AYFL013W-A 804 nt6.65□□□□□ -1.34
RPN9Q04062 NTG1YAL015C 1200 nt6.65□□□□□ -1.34
RPN9Q04062 HMS2YJR147W 1077 nt6.65□□□□□ -1.34
RPN9Q04062 RNH1YMR234W 1047 nt6.65□□□□□ -1.34
RPN9Q04062 YNR014WYNR014W 639 nt6.65□□□□□ -1.34
RPN9Q04062 EFM1YHL039W 1758 nt6.64□□□□□ -1.35
RPN9Q04062 DAL4YIR028W 1908 nt6.64□□□□□ -1.35
RPN9Q04062 HED1YDR014W-A 489 nt6.64□□□□□ -1.35
RPN9Q04062 LCL3YGL085W 825 nt6.64□□□□□ -1.35
RPN9Q04062 FAF1YIL019W 1041 nt6.64□□□□□ -1.35
RPN9Q04062 LSC1YOR142W 990 nt6.64□□□□□ -1.35
RPN9Q04062 COQ1YBR003W 1422 nt6.64□□□□□ -1.35
RPN9Q04062 YBR241CYBR241C 1467 nt6.64□□□□□ -1.35
RPN9Q04062 FRE5YOR384W 2085 nt6.64□□□□□ -1.35
RPN9Q04062 EHD3YDR036C 1503 nt6.63□□□□□ -1.35
RPN9Q04062 TPK1YJL164C 1194 nt6.63□□□□□ -1.35
RPN9Q04062 GFA1YKL104C 2154 nt6.63□□□□□ -1.35
RPN9Q04062 KIN1YDR122W 3195 nt6.62□□□□□ -1.35
RPN9Q04062 MAK32YCR019W 1092 nt6.62□□□□□ -1.35
RPN9Q04062 PPH22YDL188C 1134 nt6.62□□□□□ -1.35
RPN9Q04062 MRPS18YNL306W 654 nt6.62□□□□□ -1.35
RPN9Q04062 IRC11YOR013W 471 nt6.62□□□□□ -1.35
RPN9Q04062 DFR1YOR236W 636 nt6.62□□□□□ -1.35
RPN9Q04062 PPM2YOL141W 2088 nt6.62□□□□□ -1.35
RPN9Q04062 SHO1YER118C 1104 nt6.61□□□□□ -1.35
RPN9Q04062 QCR6YFR033C 444 nt6.61□□□□□ -1.35
RPN9Q04062 YIL029W-AYIL029W-A 372 nt6.61□□□□□ -1.35
RPN9Q04062 TAF9YMR236W 474 nt6.61□□□□□ -1.35
RPN9Q04062 MRPL23YOR150W 492 nt6.61□□□□□ -1.35
RPN9Q04062 COX10YPL172C 1389 nt6.6□□□□□ -1.35
RPN9Q04062 MRPL35YDR322W 1104 nt6.6□□□□□ -1.35
RPN9Q04062 YHK8YHR048W 1545 nt6.6□□□□□ -1.35
RPN9Q04062 SAL1YNL083W 1485 nt6.6□□□□□ -1.35
RPN9Q04062 STT3YGL022W 2157 nt6.59□□□□□ -1.35
RPN9Q04062 HIS1YER055C 894 nt6.59□□□□□ -1.35
RPN9Q04062 YKL102CYKL102C 306 nt6.59□□□□□ -1.35
RPN9Q04062 GCN3YKR026C 918 nt6.59□□□□□ -1.35
RPN9Q04062 YBR226CYBR226C 411 nt6.59□□□□□ -1.35
RPN9Q04062 YPL277CYPL277C 1464 nt6.59□□□□□ -1.36
RPN9Q04062 CYC8YBR112C 2901 nt6.59□□□□□ -1.36
RPN9Q04062 tG(GCC)BtG(GCC)B 71 nt6.58□□□□□ -1.36
RPN9Q04062 SUF16tG(GCC)C 71 nt6.58□□□□□ -1.36
RPN9Q04062 tG(GCC)D1tG(GCC)D1 71 nt6.58□□□□□ -1.36
RPN9Q04062 tG(GCC)D2tG(GCC)D2 71 nt6.58□□□□□ -1.36
RPN9Q04062 tG(GCC)EtG(GCC)E 71 nt6.58□□□□□ -1.36
RPN9Q04062 SUF20tG(GCC)F1 71 nt6.58□□□□□ -1.36
RPN9Q04062 tG(GCC)F2tG(GCC)F2 71 nt6.58□□□□□ -1.36
RPN9Q04062 tG(GCC)G1tG(GCC)G1 71 nt6.58□□□□□ -1.36
RPN9Q04062 tG(GCC)G2tG(GCC)G2 71 nt6.58□□□□□ -1.36
RPN9Q04062 tG(GCC)J1tG(GCC)J1 71 nt6.58□□□□□ -1.36
RPN9Q04062 SUF23tG(GCC)J2 71 nt6.58□□□□□ -1.36
RPN9Q04062 tG(GCC)MtG(GCC)M 71 nt6.58□□□□□ -1.36
RPN9Q04062 tG(GCC)O1tG(GCC)O1 71 nt6.58□□□□□ -1.36
RPN9Q04062 SUF17tG(GCC)O2 71 nt6.58□□□□□ -1.36
RPN9Q04062 tG(GCC)P1tG(GCC)P1 71 nt6.58□□□□□ -1.36
RPN9Q04062 tG(GCC)P2tG(GCC)P2 71 nt6.58□□□□□ -1.36
RPN9Q04062 GCG1YER163C 699 nt6.58□□□□□ -1.36
RPN9Q04062 COG1YGL223C 1254 nt6.58□□□□□ -1.36
RPN9Q04062 COX16YJL003W 357 nt6.58□□□□□ -1.36
RPN9Q04062 YRB2YIL063C 984 nt6.57□□□□□ -1.36
RPN9Q04062 MIA40YKL195W 1212 nt6.57□□□□□ -1.36
RPN9Q04062 TKL2YBR117C 2046 nt6.56□□□□□ -1.36
RPN9Q04062 OM45YIL136W 1182 nt6.56□□□□□ -1.36
RPN9Q04062 RRN10YBL025W 438 nt6.56□□□□□ -1.36
RPN9Q04062 YNL092WYNL092W 1203 nt6.56□□□□□ -1.36
RPN9Q04062 RFC4YOL094C 972 nt6.56□□□□□ -1.36
RPN9Q04062 HXT2YMR011W 1626 nt6.56□□□□□ -1.36
RPN9Q04062 PEX31YGR004W 1389 nt6.56□□□□□ -1.36
RPN9Q04062 AIM20YIL158W 615 nt6.55□□□□□ -1.36
RPN9Q04062 ATG36YJL185C 882 nt6.55□□□□□ -1.36
RPN9Q04062 ERG8YMR220W 1356 nt6.55□□□□□ -1.36
RPN9Q04062 FAL1YDR021W 1200 nt6.54□□□□□ -1.36
RPN9Q04062 YHR213W-BYHR213W-B 300 nt6.54□□□□□ -1.36
RPN9Q04062 ERP2YAL007C 648 nt6.54□□□□□ -1.36
RPN9Q04062 RMA1YKL132C 1293 nt6.54□□□□□ -1.36
RPN9Q04062 YAR064WYAR064W 300 nt6.54□□□□□ -1.36
RPN9Q04062 CUE4YML101C 354 nt6.54□□□□□ -1.36
RPN9Q04062 YPL257WYPL257W 582 nt6.54□□□□□ -1.36
RPN9Q04062 GLN3YER040W 2193 nt6.53□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 23.7 ms