Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 YAR064WYAR064W 300 nt7.04□□□□□ -1.28
RPA49Q01080 IRC11YOR013W 471 nt7.04□□□□□ -1.28
RPA49Q01080 EFM1YHL039W 1758 nt7.04□□□□□ -1.28
RPA49Q01080 SEC23YPR181C 2307 nt7.04□□□□□ -1.28
RPA49Q01080 MIP1YOR330C 3765 nt7.04□□□□□ -1.28
RPA49Q01080 SRF1YDL133W 1314 nt7.03□□□□□ -1.28
RPA49Q01080 CUE4YML101C 354 nt7.03□□□□□ -1.28
RPA49Q01080 YPL136WYPL136W 369 nt7.03□□□□□ -1.28
RPA49Q01080 IDP3YNL009W 1263 nt7.02□□□□□ -1.29
RPA49Q01080 YNR014WYNR014W 639 nt7.02□□□□□ -1.29
RPA49Q01080 RBS1YDL189W 1374 nt7.02□□□□□ -1.29
RPA49Q01080 AFG2YLR397C 2343 nt7.02□□□□□ -1.29
RPA49Q01080 KIN1YDR122W 3195 nt7.02□□□□□ -1.29
RPA49Q01080 SGV1YPR161C 1974 nt7.01□□□□□ -1.29
RPA49Q01080 ERG8YMR220W 1356 nt7.01□□□□□ -1.29
RPA49Q01080 RFC4YOL094C 972 nt7.01□□□□□ -1.29
RPA49Q01080 GUT1YHL032C 2130 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)BtG(GCC)B 71 nt7□□□□□ -1.29
RPA49Q01080 SUF16tG(GCC)C 71 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)D1tG(GCC)D1 71 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)D2tG(GCC)D2 71 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)EtG(GCC)E 71 nt7□□□□□ -1.29
RPA49Q01080 SUF20tG(GCC)F1 71 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)F2tG(GCC)F2 71 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)G1tG(GCC)G1 71 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)G2tG(GCC)G2 71 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)J1tG(GCC)J1 71 nt7□□□□□ -1.29
RPA49Q01080 SUF23tG(GCC)J2 71 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)MtG(GCC)M 71 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)O1tG(GCC)O1 71 nt7□□□□□ -1.29
RPA49Q01080 SUF17tG(GCC)O2 71 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)P1tG(GCC)P1 71 nt7□□□□□ -1.29
RPA49Q01080 tG(GCC)P2tG(GCC)P2 71 nt7□□□□□ -1.29
RPA49Q01080 STT3YGL022W 2157 nt6.99□□□□□ -1.29
RPA49Q01080 YHR218W-AYHR218W-A 318 nt6.99□□□□□ -1.29
RPA49Q01080 COX16YJL003W 357 nt6.99□□□□□ -1.29
RPA49Q01080 MHT1YLL062C 975 nt6.99□□□□□ -1.29
RPA49Q01080 YBL112CYBL112C 318 nt6.99□□□□□ -1.29
RPA49Q01080 MDH1YKL085W 1005 nt6.98□□□□□ -1.29
RPA49Q01080 GCN3YKR026C 918 nt6.98□□□□□ -1.29
RPA49Q01080 PPH22YDL188C 1134 nt6.97□□□□□ -1.29
RPA49Q01080 HIS1YER055C 894 nt6.97□□□□□ -1.29
RPA49Q01080 TSR2YLR435W 618 nt6.97□□□□□ -1.29
RPA49Q01080 PPS1YBR276C 2424 nt6.97□□□□□ -1.29
RPA49Q01080 EDE1YBL047C 4146 nt6.96□□□□□ -1.3
RPA49Q01080 VMA3YEL027W 483 nt6.96□□□□□ -1.3
RPA49Q01080 YJR146WYJR146W 354 nt6.96□□□□□ -1.3
RPA49Q01080 YKR045CYKR045C 552 nt6.96□□□□□ -1.3
RPA49Q01080 KSH1YNL024C-A 219 nt6.96□□□□□ -1.3
RPA49Q01080 CCT8YJL008C 1707 nt6.96□□□□□ -1.3
RPA49Q01080 PRY3YJL078C 2646 nt6.95□□□□□ -1.3
RPA49Q01080 POR2YIL114C 846 nt6.95□□□□□ -1.3
RPA49Q01080 YLR361C-AYLR361C-A 297 nt6.95□□□□□ -1.3
RPA49Q01080 YMR252CYMR252C 405 nt6.95□□□□□ -1.3
RPA49Q01080 YBR027CYBR027C 333 nt6.95□□□□□ -1.3
RPA49Q01080 OPI11YPR044C 354 nt6.95□□□□□ -1.3
RPA49Q01080 GPD2YOL059W 1323 nt6.95□□□□□ -1.3
RPA49Q01080 PEX31YGR004W 1389 nt6.95□□□□□ -1.3
RPA49Q01080 FAL1YDR021W 1200 nt6.94□□□□□ -1.3
RPA49Q01080 GAL83YER027C 1254 nt6.94□□□□□ -1.3
RPA49Q01080 MIA40YKL195W 1212 nt6.94□□□□□ -1.3
RPA49Q01080 OGG1YML060W 1131 nt6.94□□□□□ -1.3
RPA49Q01080 RUF23RUF23 254 nt6.94□□□□□ -1.3
RPA49Q01080 DFR1YOR236W 636 nt6.94□□□□□ -1.3
RPA49Q01080 CTF19YPL018W 1110 nt6.94□□□□□ -1.3
RPA49Q01080 YPL257WYPL257W 582 nt6.94□□□□□ -1.3
RPA49Q01080 HAL5YJL165C 2568 nt6.94□□□□□ -1.3
RPA49Q01080 NDE1YMR145C 1683 nt6.93□□□□□ -1.3
RPA49Q01080 YIL108WYIL108W 2091 nt6.93□□□□□ -1.3
RPA49Q01080 LYS1YIR034C 1122 nt6.93□□□□□ -1.3
RPA49Q01080 RMA1YKL132C 1293 nt6.93□□□□□ -1.3
RPA49Q01080 DID2YKR035W-A 615 nt6.93□□□□□ -1.3
RPA49Q01080 YLR184WYLR184W 348 nt6.93□□□□□ -1.3
RPA49Q01080 YPL250W-AYPL250W-A 288 nt6.93□□□□□ -1.3
RPA49Q01080 YLL066CYLL066C 3618 nt6.93□□□□□ -1.3
RPA49Q01080 UIP5YKR044W 1332 nt6.93□□□□□ -1.3
RPA49Q01080 OSW2YLR054C 2175 nt6.92□□□□□ -1.3
RPA49Q01080 YDR415CYDR415C 1125 nt6.92□□□□□ -1.3
RPA49Q01080 YOR300WYOR300W 309 nt6.92□□□□□ -1.3
RPA49Q01080 YPT1YFL038C 621 nt6.91□□□□□ -1.3
RPA49Q01080 TFG2YGR005C 1203 nt6.91□□□□□ -1.3
RPA49Q01080 DYS1YHR068W 1164 nt6.91□□□□□ -1.3
RPA49Q01080 TOS6YNL300W 309 nt6.91□□□□□ -1.3
RPA49Q01080 RPL5YPL131W 894 nt6.91□□□□□ -1.3
RPA49Q01080 CCR4YAL021C 2514 nt6.91□□□□□ -1.3
RPA49Q01080 ZWF1YNL241C 1518 nt6.91□□□□□ -1.3
RPA49Q01080 YDR187CYDR187C 519 nt6.9□□□□□ -1.3
RPA49Q01080 HEM2YGL040C 1029 nt6.9□□□□□ -1.3
RPA49Q01080 YJR107WYJR107W 987 nt6.9□□□□□ -1.3
RPA49Q01080 DRE2YKR071C 1047 nt6.9□□□□□ -1.3
RPA49Q01080 CUP2YGL166W 678 nt6.89□□□□□ -1.31
RPA49Q01080 YKR032WYKR032W 315 nt6.89□□□□□ -1.31
RPA49Q01080 YNL120CYNL120C 486 nt6.89□□□□□ -1.31
RPA49Q01080 ADH5YBR145W 1056 nt6.89□□□□□ -1.31
RPA49Q01080 TAE1YBR261C 699 nt6.89□□□□□ -1.31
RPA49Q01080 YNL040WYNL040W 1371 nt6.89□□□□□ -1.31
RPA49Q01080 HEM1YDR232W 1647 nt6.89□□□□□ -1.31
RPA49Q01080 CDC1YDR182W 1476 nt6.88□□□□□ -1.31
RPA49Q01080 YMR122CYMR122C 375 nt6.88□□□□□ -1.31
RPA49Q01080 MSO1YNR049C 633 nt6.88□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 84.1 ms