Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
PDX1P52945 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDX1P52945 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDX1P52945 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDX1P52945 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDX1P52945 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDX1P52945 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
PDX1P52945 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PDX1P52945 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PDX1P52945 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDX1P52945 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.88■■□□□ 1.41
PDX1P52945 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDX1P52945 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDX1P52945 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.87■■□□□ 1.41
PDX1P52945 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDX1P52945 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.87■■□□□ 1.41
PDX1P52945 AL451085.2-201ENST00000605085 799 ntBASIC23.87■■□□□ 1.41
PDX1P52945 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.87■■□□□ 1.41
PDX1P52945 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
PDX1P52945 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
PDX1P52945 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PDX1P52945 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDX1P52945 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
PDX1P52945 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.86■■□□□ 1.41
PDX1P52945 AL035685.1-201ENST00000636663 812 ntBASIC23.86■■□□□ 1.41
PDX1P52945 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDX1P52945 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDX1P52945 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDX1P52945 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
PDX1P52945 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDX1P52945 AP002414.2-202ENST00000590929 1450 ntBASIC23.85■■□□□ 1.41
PDX1P52945 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PDX1P52945 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.85■■□□□ 1.41
PDX1P52945 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDX1P52945 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.84■■□□□ 1.41
PDX1P52945 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PDX1P52945 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDX1P52945 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.84■■□□□ 1.41
PDX1P52945 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.84■■□□□ 1.41
PDX1P52945 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDX1P52945 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
PDX1P52945 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.83■■□□□ 1.41
PDX1P52945 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.83■■□□□ 1.4
PDX1P52945 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.82■■□□□ 1.4
PDX1P52945 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PDX1P52945 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.81■■□□□ 1.4
PDX1P52945 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.81■■□□□ 1.4
PDX1P52945 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.81■■□□□ 1.4
PDX1P52945 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDX1P52945 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.81■■□□□ 1.4
PDX1P52945 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDX1P52945 AC010980.1-201ENST00000587192 1142 ntBASIC23.8■■□□□ 1.4
PDX1P52945 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDX1P52945 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDX1P52945 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PDX1P52945 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDX1P52945 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDX1P52945 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PDX1P52945 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PDX1P52945 MIR3960-201ENST00000583311 91 ntBASIC23.79■■□□□ 1.4
PDX1P52945 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.79■■□□□ 1.4
PDX1P52945 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.79■■□□□ 1.4
PDX1P52945 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDX1P52945 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDX1P52945 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.78■■□□□ 1.4
PDX1P52945 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDX1P52945 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.77■■□□□ 1.4
PDX1P52945 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDX1P52945 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDX1P52945 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDX1P52945 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDX1P52945 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.76■■□□□ 1.39
PDX1P52945 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.76■■□□□ 1.39
PDX1P52945 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDX1P52945 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDX1P52945 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDX1P52945 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDX1P52945 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDX1P52945 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PDX1P52945 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PDX1P52945 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PDX1P52945 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDX1P52945 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.74■■□□□ 1.39
PDX1P52945 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.74■■□□□ 1.39
PDX1P52945 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.74■■□□□ 1.39
PDX1P52945 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDX1P52945 KRT8P33-201ENST00000508125 1423 ntBASIC23.74■■□□□ 1.39
PDX1P52945 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDX1P52945 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDX1P52945 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.73■■□□□ 1.39
PDX1P52945 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDX1P52945 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDX1P52945 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PDX1P52945 BHLHE23-202ENST00000612929 1109 ntBASIC23.73■■□□□ 1.39
PDX1P52945 MIR6765-201ENST00000614092 87 ntBASIC23.73■■□□□ 1.39
PDX1P52945 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDX1P52945 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDX1P52945 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDX1P52945 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDX1P52945 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms