Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SDHAP31040 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SDHAP31040 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SDHAP31040 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SDHAP31040 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.97■■□□□ 1.11
SDHAP31040 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SDHAP31040 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.97■■□□□ 1.11
SDHAP31040 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
SDHAP31040 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SDHAP31040 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.97■■□□□ 1.11
SDHAP31040 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.97■■□□□ 1.11
SDHAP31040 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.97■■□□□ 1.11
SDHAP31040 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDHAP31040 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDHAP31040 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDHAP31040 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.96■■□□□ 1.11
SDHAP31040 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.96■■□□□ 1.11
SDHAP31040 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.95■■□□□ 1.1
SDHAP31040 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.95■■□□□ 1.1
SDHAP31040 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHAP31040 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.95■■□□□ 1.1
SDHAP31040 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHAP31040 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHAP31040 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHAP31040 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHAP31040 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.95■■□□□ 1.1
SDHAP31040 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHAP31040 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDHAP31040 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.94■■□□□ 1.1
SDHAP31040 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDHAP31040 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SDHAP31040 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDHAP31040 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDHAP31040 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDHAP31040 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDHAP31040 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.93■■□□□ 1.1
SDHAP31040 HLA-V-202ENST00000446817 847 ntBASIC21.93■■□□□ 1.1
SDHAP31040 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDHAP31040 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDHAP31040 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDHAP31040 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDHAP31040 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SDHAP31040 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.91■■□□□ 1.1
SDHAP31040 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SDHAP31040 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
SDHAP31040 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDHAP31040 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDHAP31040 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SDHAP31040 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SDHAP31040 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDHAP31040 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.9■■□□□ 1.1
SDHAP31040 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.9■■□□□ 1.1
SDHAP31040 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SDHAP31040 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SDHAP31040 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SDHAP31040 CR559946.2-201ENST00000623684 991 ntBASIC21.89■■□□□ 1.09
SDHAP31040 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SDHAP31040 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.89■■□□□ 1.09
SDHAP31040 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SDHAP31040 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SDHAP31040 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.88■■□□□ 1.09
SDHAP31040 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SDHAP31040 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SDHAP31040 ABHD17AP4-201ENST00000411545 909 ntBASIC21.88■■□□□ 1.09
SDHAP31040 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.88■■□□□ 1.09
SDHAP31040 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SDHAP31040 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.88■■□□□ 1.09
SDHAP31040 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.87■■□□□ 1.09
SDHAP31040 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SDHAP31040 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SDHAP31040 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SDHAP31040 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SDHAP31040 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SDHAP31040 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.87■■□□□ 1.09
SDHAP31040 AC020928.2-201ENST00000588717 2197 ntBASIC21.87■■□□□ 1.09
SDHAP31040 AL359258.2-201ENST00000564063 1566 ntBASIC21.87■■□□□ 1.09
SDHAP31040 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SDHAP31040 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SDHAP31040 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDHAP31040 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDHAP31040 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDHAP31040 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.85■■□□□ 1.09
SDHAP31040 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDHAP31040 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDHAP31040 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDHAP31040 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDHAP31040 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDHAP31040 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
SDHAP31040 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SDHAP31040 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SDHAP31040 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDHAP31040 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SDHAP31040 AC010501.1-201ENST00000606270 1962 ntBASIC21.83■■□□□ 1.09
SDHAP31040 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SDHAP31040 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
SDHAP31040 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SDHAP31040 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SDHAP31040 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.82■■□□□ 1.08
SDHAP31040 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.82■■□□□ 1.08
SDHAP31040 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms