Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 INTS11-235ENST00000527719 750 ntTSL 521.47■■□□□ 1.039e-9■■■■□ 26.6
XRCC6P12956 INTS11-239ENST00000531019 549 ntTSL 421.14■□□□□ 0.979e-9■■■■□ 26.6
XRCC6P12956 INTS11-224ENST00000498476 554 ntTSL 421.14■□□□□ 0.979e-9■■■■□ 26.6
XRCC6P12956 INTS11-230ENST00000526332 579 ntTSL 421.14■□□□□ 0.979e-9■■■■□ 26.6
XRCC6P12956 INTS11-219ENST00000490853 704 ntTSL 321■□□□□ 0.959e-9■■■■□ 26.6
XRCC6P12956 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.81■□□□□ 0.929e-9■■■■□ 26.6
XRCC6P12956 INTS11-215ENST00000470679 584 ntTSL 520.37■□□□□ 0.859e-9■■■■□ 26.6
XRCC6P12956 INTS11-210ENST00000458452 2571 ntTSL 220.17■□□□□ 0.829e-9■■■■□ 26.6
XRCC6P12956 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.07■□□□□ 0.89e-9■■■■□ 26.6
XRCC6P12956 INTS11-218ENST00000488042 1134 ntTSL 219.98■□□□□ 0.799e-9■■■■□ 26.6
XRCC6P12956 INTS11-201ENST00000323275 2450 ntTSL 1 (best)19.97■□□□□ 0.799e-9■■■■□ 26.6
XRCC6P12956 INTS11-233ENST00000527098 2004 ntTSL 219.85■□□□□ 0.779e-9■■■■□ 26.6
XRCC6P12956 INTS11-243ENST00000532772 1618 ntTSL 519.75■□□□□ 0.759e-9■■■■□ 26.6
XRCC6P12956 INTS11-237ENST00000530031 800 ntTSL 519.61■□□□□ 0.739e-9■■■■□ 26.6
XRCC6P12956 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.6■□□□□ 0.739e-9■■■■□ 26.6
XRCC6P12956 INTS11-207ENST00000434694 1056 ntTSL 519.48■□□□□ 0.719e-9■■■■□ 26.6
XRCC6P12956 INTS11-232ENST00000526904 551 ntTSL 418.67■□□□□ 0.589e-9■■■■□ 26.6
XRCC6P12956 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.88■□□□□ 0.459e-9■■■■□ 26.6
XRCC6P12956 INTS11-236ENST00000528879 1524 ntTSL 516.85■□□□□ 0.299e-9■■■■□ 26.6
XRCC6P12956 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.77■□□□□ 0.279e-9■■■■□ 26.6
XRCC6P12956 INTS11-226ENST00000525285 579 ntTSL 416.66■□□□□ 0.269e-9■■■■□ 26.6
XRCC6P12956 INTS11-206ENST00000430786 849 ntTSL 516.55■□□□□ 0.249e-9■■■■□ 26.6
XRCC6P12956 INTS11-229ENST00000526113 591 ntTSL 515.49■□□□□ 0.079e-9■■■■□ 26.6
XRCC6P12956 INTS11-244ENST00000532952 773 ntTSL 315.33■□□□□ 0.049e-9■■■■□ 26.6
XRCC6P12956 INTS11-246ENST00000534345 485 ntTSL 413.5□□□□□ -0.259e-9■■■■□ 26.6
XRCC6P12956 INTS11-231ENST00000526797 659 ntTSL 413.48□□□□□ -0.259e-9■■■■□ 26.6
XRCC6P12956 RICTOR-210ENST00000515846 677 ntTSL 58□□□□□ -1.138e-9■■■■□ 26.6
XRCC6P12956 RICTOR-205ENST00000509567 638 ntTSL 35.54□□□□□ -1.528e-9■■■■□ 26.6
XRCC6P12956 RNA5SP481-201ENST00000516814 122 ntBASIC1.98□□□□□ -2.099e-27■■■■□ 26.5
XRCC6P12956 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC12.73□□□□□ -0.378e-8■■■■□ 26.5
XRCC6P12956 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.818e-8■■■■□ 26.5
XRCC6P12956 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.988e-8■■■■□ 26.5
XRCC6P12956 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.21e-7■■■■□ 26.3
XRCC6P12956 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.921e-7■■■■□ 26.3
XRCC6P12956 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.743e-23■■■■□ 26.2
XRCC6P12956 RPS12-202ENST00000484616 639 ntTSL 23.45□□□□□ -1.863e-23■■■■□ 26.2
XRCC6P12956 SNORD101-201ENST00000384027 73 ntBASIC0.5□□□□□ -2.333e-23■■■■□ 26.2
XRCC6P12956 KDM4B-210ENST00000592175 562 ntTSL 418.24■□□□□ 0.513e-6■■■■□ 26.1
XRCC6P12956 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.734e-6■■■■□ 25.9
XRCC6P12956 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.814e-6■■■■□ 25.9
XRCC6P12956 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.274e-6■■■■□ 25.8
XRCC6P12956 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.724e-6■■■■□ 25.8
XRCC6P12956 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.46e-9■■■■□ 25.8
XRCC6P12956 CKB-209ENST00000554705 803 ntTSL 221.49■■□□□ 1.031e-6■■■■□ 25.8
XRCC6P12956 CKB-213ENST00000555659 755 ntTSL 220.8■□□□□ 0.921e-6■■■■□ 25.8
XRCC6P12956 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.864e-10■■■■□ 25.8
XRCC6P12956 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.141e-19■■■■□ 25.7
XRCC6P12956 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.521e-6■■■■□ 25.6
XRCC6P12956 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.421e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-214ENST00000467200 3634 ntAPPRIS ALT2 TSL 1 (best)12.25□□□□□ -0.451e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.521e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.521e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.531e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.551e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.551e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.681e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.711e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.751e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC10.03□□□□□ -0.81e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.811e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.821e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.91e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.941e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.941e-8■■■■□ 25.6
XRCC6P12956 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -11e-8■■■■□ 25.6
XRCC6P12956 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.95■□□□□ 0.786e-7■■■■□ 25.5
XRCC6P12956 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.316e-7■■■■□ 25.5
XRCC6P12956 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.226e-7■■■■□ 25.5
XRCC6P12956 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.16■■□□□ 1.782e-11■■■■□ 25.4
XRCC6P12956 RBM6-202ENST00000419610 2128 ntTSL 224.81■■□□□ 1.567e-10■■■■□ 25.4
XRCC6P12956 CADM1-207ENST00000537140 1646 ntTSL 1 (best)24.72■■□□□ 1.552e-11■■■■□ 25.4
XRCC6P12956 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC24.38■■□□□ 1.497e-10■■■■□ 25.4
XRCC6P12956 RBM6-205ENST00000425608 1886 ntTSL 222.03■■□□□ 1.124e-6■■■■□ 25.4
XRCC6P12956 CADM1-210ENST00000540951 572 ntTSL 321.62■■□□□ 1.052e-11■■■■□ 25.4
XRCC6P12956 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 15e-6■■■■□ 25.4
XRCC6P12956 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.12■□□□□ 0.977e-10■■■■□ 25.4
XRCC6P12956 CADM1-218ENST00000545380 2373 ntTSL 1 (best)21.07■□□□□ 0.962e-11■■■■□ 25.4
XRCC6P12956 RBM6-209ENST00000441115 1876 ntTSL 220.84■□□□□ 0.934e-6■■■■□ 25.4
XRCC6P12956 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.8■□□□□ 0.923e-6■■■■□ 25.4
XRCC6P12956 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.864e-6■■■■□ 25.4
XRCC6P12956 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.822e-6■■■■□ 25.4
XRCC6P12956 VPS37A-203ENST00000518038 655 ntTSL 319.94■□□□□ 0.784e-6■■■■□ 25.4
XRCC6P12956 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.74e-6■■■■□ 25.4
XRCC6P12956 DDB2-212ENST00000617022 2181 ntTSL 219.33■□□□□ 0.694e-6■■■■□ 25.4
XRCC6P12956 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.653e-7■■■■□ 25.4
XRCC6P12956 DDB2-203ENST00000378601 1591 ntTSL 218.42■□□□□ 0.544e-6■■■■□ 25.4
XRCC6P12956 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.547e-10■■■■□ 25.4
XRCC6P12956 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.52e-6■■■■□ 25.4
XRCC6P12956 DDB2-216ENST00000622878 556 ntTSL 417.83■□□□□ 0.444e-6■■■■□ 25.4
XRCC6P12956 CADM1-211ENST00000541434 1112 ntTSL 1 (best)17.63■□□□□ 0.412e-11■■■■□ 25.4
XRCC6P12956 VPS37A-204ENST00000519381 575 ntTSL 417.57■□□□□ 0.44e-6■■■■□ 25.4
XRCC6P12956 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC17.2■□□□□ 0.342e-11■■■■□ 25.4
XRCC6P12956 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC17.18■□□□□ 0.347e-10■■■■□ 25.4
XRCC6P12956 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC16.32■□□□□ 0.22e-11■■■■□ 25.4
XRCC6P12956 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC16.07■□□□□ 0.165e-6■■■■□ 25.4
XRCC6P12956 VPS37A-206ENST00000520140 2102 ntTSL 515.83■□□□□ 0.134e-6■■■■□ 25.4
XRCC6P12956 RBM6-217ENST00000483350 988 ntTSL 315.73■□□□□ 0.114e-6■■■■□ 25.4
XRCC6P12956 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.044e-6■■■■□ 25.4
XRCC6P12956 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.034e-6■■■■□ 25.4
XRCC6P12956 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.072e-11■■■■□ 25.4
Retrieved 100 of 6,788 protein–RNA pairs in 96.4 ms